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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running …
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Effects of Polar Light Cycle on Microbial Food Web
… Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Laboratory (Berkeley Lab). The work was enabled by the JGI’s Community Science Program. For most months each year, …
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Streamlining Regulon Identification in Bacteria
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Nature Communications on June 17 , 2022, was conducted by JGI Director Nigel Mouncey and research scientist Hiroshi Otani. Both are members of the JGI’s Secondary Metabolite Science Program, which Mouncey …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … ( Learn more about OGG in  this episode of to the JGI podcast Genome Insider . ) Summary A recent paper … of seed plants and ferns. The genome is available on the JGI’s plant portal, Phytozome . Researchers hope to have …
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2025 Progress Report
… JGI researchers demonstrate how their laboratory and data …
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Mapping Heat Resistance in Yeasts
… biofuel production. Efforts such as the 1000 Fungal Genomics Project led by the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility of Lawrence … grew well; the survivors had their DNA sequenced at the JGI as part of a 2014 Community Science Program project. The …
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Busting the Unbreakable Lignin
… Research Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential genes responsible for lignin deconstruction. (The JGI also conducted RNA sequencing and alignment to the …
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Eelgrass Proves to Be Much Younger Than We Thought
… Program (CSP 502951, 2016, Population and evolutionary genomics of host–microbiome interactions in Zostera marina and …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory. The JGI sequenced the shrub willows through the  Community …
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How Maize Makes An Antibiotic Cocktail
… as  Sorghum bicolor — a  candidate bioenergy feedstock and  JGI Flagship Plant — could produce at least 15 zealexins. … with zealexin synthesis. The researchers used proteomics to home in on precise biosynthetic enzymes elicited by … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  …
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Defining a Pan-Genome for Antarctic Archaea
… applications. The work has been enabled through the JGI Community Science Program (CSP) . Cavicchioli and his … The genome and metagenome data are available through JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… plant lineages makes it ideal for comparative genomics studies, offering insight into genes critical for … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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