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User Programs
Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED CLOSED ONGOING ONGOING Who Should Apply? Investigators with research …
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CO2 response screen in grass Brachypodium reveals the key role of a MAP kinase in CO2-triggered stomatal closure
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Functional plasticity of HCO3 – uptake and CO2 fixation in Cupriavidus necator H16
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User Executive Committee Charter
… (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their … and the annual user meeting. The UEC also acts as a liaison to the user community and the broader scientific …
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A Grass Model to Help Improve Giant Miscanthus
… chromosomes of  Miscanthus arose by ancient hybridization (polyploidy) and insights into the dynamics of gene … history and perennial lifecycle makes it important to study directly. The large and complex genome of  M. sinensis was  recently published in  Nature Communications by an international, …
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Waiting to Respire
… to ancestral bacteria’s energy sources. More than two billion years ago, cyanobacteria acquired the ability to produce … fellow Paula Matheus Carnevali was working with a group of metagenome-assembled genomes (MAGs) dubbed Margulisbacteria, … The research teams opted to collaborate on a single study, with Matheus Carnevali and Schulz sharing co-first …
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JGI Workshop at SIMB NP Meeting
Jan. 7: New Capabilities to Study Secondary Metabolism   Although there are still a large number of secondary metabolites yet to be discovered and their …
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Busting the Unbreakable Lignin
… shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main ingredients to … order to do so is a resource-intensive process. Now, a new study shows how anaerobic fungi — the kind living in the … California at Santa Barbara  recently published a paper in  Nature Microbiology offering irrefutable evidence that …
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Sequencing Submission Requirements for DNA Synthesis
… include the following items: … Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, Synthetic Biology Project Manager . … How To … File There are several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky Way, … categories: Catalog the human virome; Develop tools to study the human virome; Explore how the human virome … CheckV , which assesses the quality and completeness of metagenome-assembled viral genomes ( Nature Biotechnology , …
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User Support
… define the scope of work and outline roles and responsibilities resulting in a formal Statement of Work (SOW). … work performed at the JGI is initiated via the Work Initiation Process (WIP) interface. To submit a proposal, users must … JGI will need to register and create a login at https://signon.jgi.doe.gov ). Once users are notified that their …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
On February 17, 2021, JGI and the Environmental Molecular Sciences Laboratory (EMSL) co-hosted a … reach out to any of them with questions. Q:  Apart from instrumental support, how much help can users expect for data …
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