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… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a link in the evolution and transition of … as members of the ZyGoLife consortium , my colleagues and I decided to re-visit the Olpidium genome data . Taking the …

… a family of compounds that protects it against infections — using surprisingly few enzymes. The Science Maize ( Zea mays … But zealexins are almost completely limited to maize. By deciphering the zealexin synthesis pathway, this study makes … genes encoding these enzymes to another plant, such as  Sorghum bicolor — a  candidate bioenergy feedstock and  JGI …

… will help solve energy and environmental challenges. Viruses are everywhere — in soil, the sea and, of course, the cells of other organisms. As they infect microbes like bacteria, algae and … challenges, characterizing viruses is a key step. For decades, though, many viruses have been somewhat invisible …

… 2013 Nature paper , which uncovered nearly 30 major previously uncharted branches of the tree of life. A senior … Lab), Woyke currently serves as the interim deputy for JGI User Programs. Earlier this year, she was elected to the …

… insights into an ancient metabolism. Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly available metagenome data … and short-chain alkane-oxidizing archaea. They used IMG because the database already contains metagenome …

… particularly actinomycetes. His research activity is focused on developing and implementing new technologies and … interested in understanding how, when and why microbes decide to produce which metabolites. … Mouncey NJ. Comparative and pangenomic analysis of the genus Streptomyces. Sci Rep. 2022 Nov 7;12(1):18909. Otani H, …

… between.” To find an explanation, his team tracked the thousands of bacterial and archaeal species using a DNA-based array developed at Berkeley Lab. Over the next decade, the JGI’s single cell genomics and metagenomics …

… is central to our ability to offer host-engineering for our users,” says JGI Director Nigel Mouncey. Using CRAGE, JGI has established a portfolio of microbial hosts that users can select to be engineered. “Piloting access to this …

… Machine learning approach significantly expands inovirus diversity. To answer the question, “Where’s Waldo?” … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an algorithm that a computer could … methods to discover new anti-CRISPRs,” said Adair Borges, a graduate student in bacterial immunologist Joe …

… Miscanthus  sequence offers insights into benefits of polyploidy and … and genomic toolkit for the perennial grass Miscanthus sinensis has been published. Analysis of the genome … candidate bioenergy feedstock crops such as sugarcane and sorghum. The M. sinensis genome analysis explains the hybrid …

… novel technique to access high-quality genomic information using minute quantities of DNA derived from individual … microbial genomes that were mapped to nearly 30 major previously uncharted branches of the tree of life. Used in tandem over the years, metagenomics and single cell …

… and animal cells, it shares nearly 7,000 genes with other organisms (a third of those shared by both humans and … production in other algae that may be more viable for sustainable biofuel production. The JGI published a partial … been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference genome is cited …