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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… On July 8, JGI’s DNA Synthesis Science group held a  JGI Engagement: Accessing … really fully exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard … back in 2016.” Alper’s first approved JGI proposal came through the Functional Genomics (formerly DNA Synthesis) …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… A special issue of Synthetic Biology celebrates research enabled by the JGI … JGI is uniquely positioned to enable this kind of science; through its DNA Synthesis Science Program , the JGI enables … the JGI DNA Synthesis Science Program, which started in 2012, and what they’ve discovered through their …
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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a virus protein tied to carbon cycling.  The Science Through a collaborative effort, researchers have identified … The work was enabled in part by a community data portal of the U.S. Department of Energy (DOE) Joint Genome …
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Frederik Schulz
… Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His research is focussed on the discovery of … B.Sc. Biochemistry, University of Applied Sciences Mannheim (Germany) M.Sc. Molecular … Krinos et al. 2024. Time-series metagenomics reveals changing …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s … Most methane is produced in environments without oxygen through a process called methanogenesis. Methanogenic … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Digging into Microbial Ecosystems Deep Underground
… “Microbes underpin so much of what we see on earth in terms of nutrient cycles and … Microbiome . The work builds off a proposal approved through a collaborative science initiative called Facilities …
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JGI Announces 2026 New Investigator Portfolio
… Pictured from left: [Top row]: Emily G. Aguirre, Shauna M. Bennett, Laura Bogar, Michael Borg, Rory Craig, … Kumar Gautam, Gareth Gillard, Audrey Goeckner, Jennifer Goff, Sarah Gonzalez Henao, Yang Hai, Julia G. Harenčár, …
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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing technologies and … (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… Team develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter … RNA virus sequences. Using this workflow, the team combed through more than 5,000 data sets of RNA sequences …
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Jasmyn Pangilinan
… Jasmyn provides bioinformatics tools and analysis support for user science, with a … works to develop and improve supporting pipeline efficiency through streamlined workflows, enhanced portability and …
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Neha Varghese
… Neha’s key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and … She also provides support for user science and projects through implementation of advanced analysis pipelines and …
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Cultivating Symbiotic Antarctic Microbes
… Nanohaloarchaeota cultures reveal they are symbionts and not … The Impact The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in … to that of a free-living organism. First discovered in 2011, Nanohaloarchaea are part of the DPANN (Diapherotrites, …
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