Results

From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, … the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …
Learn more
Viral community analysis in a marine oxygen minimum zone indicates increased potential for viral manipulation of microbial physiological state
Learn more
Integration of Metagenomic and Stable Carbon Isotope Evidence Reveals the Extent and Mechanisms of Carbon Dioxide Fixation in High-Temperature Microbial Communities
Learn more
IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes
Learn more
Ecological Dichotomies Arise in Microbial Communities Due to Mixing of Deep Hydrothermal Waters and Atmospheric Gas in a Circumneutral Hot Spring
Learn more
The United States Culture Collection Network (USCCN): Enhancing Microbial Genomics Research through Living Microbe Culture Collections
Learn more
Linking microbial Sphagnum degradation and acetate mineralization in acidic peat bogs: from global insights to a genome-centric case study
Learn more
Position-Specific Metabolic Probing and Metagenomics of Microbial Communities Reveal Conserved Central Carbon Metabolic Network Activities at High Temperatures
Learn more
Microbial Community Field Surveys Reveal Abundant Pseudomonas Population in Sorghum Rhizosphere Composed of Many Closely Related Phylotypes
Learn more
Integrating Experimentation with Data
…   Join the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory … registration information. Sign up for our newsletter , the JGI Primer, to stay informed … The JGI and EMSL are U.S. Department of Energy (DOE) Office of …
Learn more
Learning to Look
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an … a computer could use to conduct a similar type of search in microbial and metagenomic databases. In this case, the … viruses,” said the study’s lead author Simon Roux, a JGI research scientist in the  Environmental Genomics group …
Learn more
SIPs with Standards
Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can show which … catch: SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible … multiple teams and analyses. This episode, Rex Malmstrom (JGI), and Roli Wilhelm (Purdue University), share a few …
Learn more