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The Genome of Akkermansia muciniphila, a Dedicated Intestinal Mucin Degrader, and Its Use in Exploring Intestinal Metagenomes

Shotgun metagenome data of a defined mock community using Oxford Nanopore, PacBio and Illumina technologies

A Practical Approach to Using the Genomic Standards Consortium MIxS Reporting Standard for Comparative Genomics and Metagenomics

Microbiome engineering for sustainable agriculture: using synthetic biology to enhance nitrogen metabolism in plant-associated microbes

Extracting Protein-Protein Interactions (PPIs) from Biomedical Literature using Attention-based Relational Context Information

Genome-wide fitness profiling reveals molecular mechanisms that bacteria use to interact with Trichoderma atroviride exometabolites

Evolution of copper arsenate resistance for enhanced enargite bioleaching using the extreme thermoacidophile Metallosphaera sedula

Engineering Pseudomonas putida for efficient aromatic conversion to bioproduct using high throughput screening in a bioreactor

Automated group assignment in large phylogenetic trees using GRUNT: GRouping, Ungrouping, Naming Tool

An Automated Tool for Assessing Virus Data Quality

… are being recovered and identified from environmental samples (metagenomes). However, the quality and completeness … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Additionally, CheckV was able to identify just over 17,000 contiguous sequences (contigs) of proviruses flanked …

Evolution of a Fungal Gene Expression Regulator

… least one reference genome for every family of fungi, the 1000 Fungal Genomes initiative of the U.S. Department of … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and others like it, are uncovering the true … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the …

PhycoCosm Tutorial

… (JGI), a US Department of Energy Office of Science user facility at Berkeley Lab. Presented by Igor Grigoriev, …

Lawrence Berkeley National Laboratory is a U.S. DOE Office of Science
national laboratory managed by the University of California.