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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy … of the tetraploid M. sacchariflorus whole genome sequence data was funded by the BBSRC Core Strategic Programme in … sinensis genome … CABBI Sequences Miscanthus Genome … Datasets … From our partners …
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Uncovering Novel Genomes from Earth’s Microbiomes
Large-scale comparative analysis leads to identification of … Lab), and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial communities in … and research scientist in Nikos Kyrpides’  Microbiome Data Science group. “What makes this study really stand out …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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Nick Everson
Mr. Everson rejoined the JGI in 2020  and leads all aspects of JGI Operations which include the Safety, … at the UC Berkeley Haas School of Business Served as a reviewer for DOE’s Science & Operations Peer Review of the …
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Applying Viral Genomics Expertise to Understanding the Human Virome
JGI researchers lend expertise to develop tools and data hub for NIH … (“contigs”) from thousands of ecologically diverse metagenomics samples. The work is supported by NIH Common …
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Simon Roux
… host(s), collaboration with JGI users for analyzing viral datasets, and the organization of community-building efforts … Giant virus diversity and host interactions through global metagenomics. Nature 578, 432–436. … DOE BER Early Career … Microbiology Resource Announcements … Education … Selected Publications … Awards and Honors …
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Yasuo Yoshikuni
Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science … biochemistry in microorganisms from hidden corners. Nature Review Microbiology , 2022 DeMirci et al. Intersubunit … … DNA Synthesis Science Program … Education … Selected Publications … Awards and Honors …
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New Research Sheds Light on Diversity in the Deep Sea
Microbial communities living near hydrothermal deep-sea vents hold … at Lawrence Berkeley National Laboratory, contributed metagenomic sequencing to the study as well as  genome … and metabolic potential of the communities studied. The datasets are available on the JGI’s  Integrated Microbial …
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Triggering Morel Fruiting
A collaborative team led by Hao Tan from the Sichuan Academy of Agricultural … . … Morel Mushrooms on MycoCosm Data Portal …
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JGI-UC Merced Interns Share Their 2021 Experiences
Integration of Single Cell Transcriptomes … Exploring and Visualizing P. hallii Mutant Library … Evaluation of Binning … Transcriptomes of Rice and Arabidopsis Roots … Making Big Data Metagenomic Clustering Scalable … Cataloging Lineage …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
Ancient  Chloroflexota s ditched their flagella and other traits when migrating back to the ocean. … that enable organisms to swim around. However, genome and metagenomic sequencing conducted by the U.S. Department of …
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JGI User Executive Committee Expands
Six new members have been elected to the User Executive Committee (UEC) … or improving bioinformatics tools that can help with dataset analysis, as well as how they can be shared with and … to technical capabilities JGI offers, as well as proposal review procedures and the organization of the JGI Annual …
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