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The Surprising Structure of a Shrub Willow Sex Chromosome
… A genetic architecture that is characteristic of the sex chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. … females, a development conferred by its sex chromosomes. In humans, males are “heterogametic”: they have different sex …
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Whole-Genome Sequencing Identifies a Rice Grain Shape Mutant, gs9–1
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DAS Tool for Genome Reconstruction from Metagenomes
… contributions, is key to understanding their ecosystem functions in processes ranging from nutrient cycling to … been utilizing metagenomics as a way to study a collection of hard-to-culture microbes, but the efficacy of this … done by the Banfield lab in collaboration with the JGI), human microbiomes, natural oil seeps in Santa Barbara, …
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MGM Workshop at Fisabio Summer School 2026
… Register here for the workshop The MGM Workshop is Module 4 of the Fisabio Summer School.  The workshop is addressed to … research, the health sciences and related fields who are interested in learning and sharing concepts, tools and research results in genomics, metagenomics and the human microbiome. The workshop will train participants in …
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Training the Next Generation of Talent
… New Graduate Internship Program Builds Bridges Between DOE JGI, UC Merced Days after presenting the results of his summer research at the U.S. Department of Energy … the QSB program but giving students the opportunity to gain hands-on experience at a major sequencing center.” The …
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JGI@25: The Little Alga That Could
… genes with other organisms (a third of those shared by both humans and flowering plants). Its genome also contains … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference genome is cited in roughly 10% …
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Ancient Algae Reveal Secrets of Plant Evolution
… Research uncovers the genetic foundations that helped plants … land over 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  Zygnematophyceae , … Settlement Biomedical Research Enhancement Funds as part of a startup grant of the University of Nebraska Lincoln, …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen … Area are also co-located in the IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint Genome …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version 13 will become … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility … Phytozome Data Portal …
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Extracting the Secrets of Secondary Metabolites
… survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and … researchers at the JGI were able to monitor loss- and gain-of-function. The study’s analytical data shows peaks … Biology . When it comes to insect killer P. luminescens specifically, understanding its secondary metabolites and …
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Old can be new again: HAPPY whole genome sequencing, mapping and assembly
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An Integrated Dataset to Understand Ecosystem Interaction
… yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar trees and their … data set will help identify how different elements of the ecosystem interact and respond to changes in the … natural forests and plantations managed through human intervention. By leveraging metagenomics, scientists …
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