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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s …
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Gotta Catch 'Em Gall
… how this project unfolded, and how they worked with the JGI's metabolomics program to find out more about these weird …
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Igor Grigoriev
… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral training at UC … joint appointments as Fungal and Algal Program Head at the JGI, a Senior Scientist at Lawrence Berkeley National … genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 …
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced … researchers and help expand or develop more internship programs like the JGI Internship Program during my STEM …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… Tel Aviv University in Israel, the National Center for Biotechnology Information, and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … system. “We then looked into many more samples and refined our methodology,” Neri said. “Our team grew and so did the …
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A Complex Confection Decoded: Sugarcane Reference Genome
… now crop researchers can work toward advancing sugarcane biotechnology. The Science Considered the world’s most harvested crop by … cultivar R570 has been generated and  reported in the journal  Nature . The work led by researchers at Australia’s … Institute (https://ror.org/04xm1d337), a DOE Office of Science User Facility and the DOE Joint BioEnergy Institute, …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida high school … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … sets for the Loxahatchee Refuge,  was published in the journal  Environmental Microbiome . “Before JGI was involved, …
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DAP-seq Drives Robust Mapping of Gene Regulation
… scale of data enabled by these approaches creates a vast resource offering researchers the ability to chart regulatory … at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … broad applicability extends beyond plants. Currently, this technology is available to JGI users for studies on …
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Taking Stock of the Known and Unknown Microbial Space
… global research community.  Published January 17, 2025 in Science Advances , researchers at the U.S. Department of … data are publicly available in the National Center for Biotechnology Information (NCBI) GenBank collection and on the … representation. “When it comes to isolate genome data, our real-world touchstones, we’re just scratching the …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… provide insights into environmental tendencies The Science The  Metagenome Stability Diagram — a tool within … is of interest to the Department of Energy (DOE) Office of Science’s Biological and Environmental Research … mSystems paper , a team at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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When “The Blob” Made It Hotter Under the Water
… climate change impact on marine microbial communities. The Science A team of researchers tracked the impact of a … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of Energy (DOE) Joint Genome Institute, an Office of Science User Facility, supported by the Office of Science of …
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Tracking the Origins of Methane-Producing Microbes
… published in the Proceedings of the National Academy of Sciences , researchers at Stanford University, the Chan … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, report the … These two things combined led us to conclude that our new methanogen did not belong to the Euryarchaeota, the …
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