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… highly hands-on workshop is designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and interpretation of sequence … sequence data and enables the user to analyze these data with existing bioinformatic methods to bridge the gap from …

McMahon's lab has been sampling the microbes of that lake for over 20 years, to understand how the freshwater …

… at the supercomputing that stitches together large datasets with the assembler program MetaHipMer2. Oak Ridge National … — Summit and Frontier — that process terabytes of data with MetaHipMer2. And the National Energy Research … capable of running smaller assemblies — so we head there for a sense of what this supercomputing looks like. …

… secondary metabolites, those molecules not essential for growth yet essential for survival, may now be easier to … payloads directly into diverse microbes. Combining CRAGE with CRISPR provides researchers with a powerful addition to their toolkit to study gene …

… interns from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, … in professional development enrichment activities. For some students in the 2021 cohort, this was their first … this program’s history, two interns returned to re-engage with their mentors from the previous year and continue …

Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint Genome … plant roots, focusing on genetic components required for effective colonization. In addition, Dr. Cole is … of the Index of Cell Identity as an R package … Education … Selected Publications … Software …

Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became … Inc. in Chicago, IL. He did his postdoctoral studies with Carl Woese at the University of Illinois at … Microbial Ecology Research and Analysis ( CAMERA ). … Education … Selected Publications … Awards and Service …

… projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and integrating mathematics and … T., & Bowen, B. (2015). Analysis of metabolomics datasets with high-performance computing and metabolite atlases. … glycolysis. Oncogene, 30(48), 4765–4779. Google Scholar. … Education … Awards and Honors … Selected Publications …