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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s … study how methanogenesis takes place in the context of the genetic material of many different organisms in an … do you not know in which direction the enzyme these genes encode are used — so producing methane or consuming methane, …
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Tina Clarke
Sonoma State University. Early on Tina knew the importance of understanding human and group behaviors as her role in HR … respect and trust. Tina is very enthusiastic to be a part of the Berkeley Lab’s first Conflict Resolution Services … Company), Dublin, CA, HR Manager 2000 – 2007 New Era of Networks (Sybase Acquired Company), Pacheco, CA HR …
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iPHoP: A Matchmaker for Phages and their Hosts
With metagenomic sequencing, researchers have found more of these viruses than ever before, in all kinds of ecosystems. However, matching these viral genetic sequences to their hosts is crucial to understanding …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
UC Merced students and their JGI mentors toasted to the end of a nine-week virtual internship. The celebration was … JGI staff. According to Axel Visel and Zhong Wang, founders of this internship program, this was the largest turnout for … to ensure projects progressed despite the challenges of remote work. In addition to the knowledge gained on the …
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JGI on the 2021 Highly Cited Researchers List
… in their chosen field or fields through the publication of multiple highly cited papers during the last decade.” … Susannah Tringe Tanja Woyke Below are a few projects each of these researchers were involved in, reported on over the … in natural ecosystems, and functionally explore viral genetic diversity toward innovative biotechnological and …
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JGI-KBase Panel at SACNAS
Nov. 2: Getting Credit for Scientific Contributions of Any Size What is considered to be a scientific … students (and their mentors) how to begin establishing a professional presence through getting credit for any scientific contribution they make, whether as part of a course or internship, and before ever publishing a …
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2022 Progress Report
Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is … Area are also co-located in the IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office …
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Gene Expression: From On-Off Switch to Dial
… to expression, scientists can now opt for various shades of grey. The ability to fine-tune the level of gene expression allowed researchers to identify variations of essential genes in metabolic networks that were missed …
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A Community Resource for Secondary Metabolite Researchers
… user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most … growth and reproduction—most organisms produce a set of "secondary metabolites," chemical compounds that often confer specialized capabilities that allow the …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … energy and environmental challenges. Oh, the magical world of the cow stomach. Rumen – and its microbes – are really a …
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JGI Portals
… constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial … community resource for comparative analysis and annotation of all publicly available genomes from three domains of … descendants of ancestral genes are constructed at key phylogenetic nodes. These families allow easy access to …
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The More the Merrier: Making the Case for Plant Pan-genomes
… plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many … than any individual genome highlighting the fact that the genetic information in a single reference genome is … Plant Biology (Austria); Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben …
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