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… Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been sampling … The next 3 episodes are the story behind that giant assembly from Lake Mendota. In this episode: the software evolution that made metagenome assemblies like this possible. …

… P. psychrophila genes drive resilience when salinity fluctuates. The Science The Arctic … dead cells recorded. Samples were taken again at two, six, 12 and 24 hours. By the 24-hour mark, these algae showed … The study was funded by Natural Sciences and Engineering Research Council of Canada (NSERC) …

… Congratulations to Jane Grimwood, who has been appointed the Loretta Purdy Spencer Chair in Genomics at the HudsonAlpha Institute for Biotechnology! … has appeared on the annual Highly Cited Researchers list assembly by Clarivate Analytics. In 2020, she was named a …

… Nanohaloarchaeota cultures reveal they are symbionts and not … to carbon cycling, and is interested in understanding the genomic basis and ecological consequences of microbe-microbe … Metagenomes from enrichment cultures were sequenced and assembled by the JGI. From these assemblies, complete or …

… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she … and custom software for integrating metabolomics with genomic data (MAGI) for functional annotation and identifying unknown compounds … B.S in Biomedical Engineering, Johns Hopkins University; Ph.D. in …

… A workflow for capturing the genetic make-up of specific uncultivated … the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast majority of microbes that play key roles … The work conducted by the U.S. Department of Energy Joint Genome …

… Metagenomic datasets could help map out microbial diversity … said co-first author Dongying Wu, a member of the Functional Annotation team within the JGI’s Microbiome Data … nearly 2 million genomes, including isolates, metagenome-assembled genomes (MAGs) with varying quality scores …

… Meta-omics datasets show that CRISPR-Cas systems determine mutualism … interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  Recently , researchers used population genomics to find that while archaeal hitchhikers may often …