Search

… about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Why would your Tree ever differ from NCBI Taxonomy? … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …

… shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main ingredients to … order to do so is a resource-intensive process. Now, a new study shows how anaerobic fungi — the kind living in the … and alignment to the reference fungal  genome . The study’s pivotal NMR (nuclear magnetic resonance) data, …

… chromosomes of Miscanthus arose by ancient hybridization (polyploidy) and insights into the dynamics of gene … history and perennial lifecycle makes it important to study directly. The large and complex genome of M. sinensis … is a tetraploid, with four sets of chromosomes; the study showed that these sets descend from two now-extinct …

… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, researchers demonstrated that a new genetic mapping … species that have been separated for millions of years. The study highlights the genes that could be used to make other …

… RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are … given sigma factor are inferred. Prior to this most recent study, only 12 sigma factors and 200 genes (or 209 sigma … to 399. Two of the 11 sigma factors addressed in the study were found to control more than 100 genes, one of …

… 5,000 times bigger than most bacteria. To put it into context, it would be like a human encountering another human … at the Université des Antilles and a co-first author on the study, performed the 16S rRNA gene sequencing to identify … continue research on the project. At the JGI, Volland began studying Ca. T. magnifica in Tanja Woyke’s Single Cells …

… Methane-producing archaea are estimated to produce 500 million tons of methane a year, which is over half the total … were then sequenced separately. From these samples, 111 metagenome-assembled genomes (MAGs) were recovered, most of … is typically observed, but to the “TACK” superphylum,” said study first author Bojk Berghuis. “This provided us with …

… from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the IGB. Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  As a U.S. … of primary users — 2,456 — had active proposals with us, along with more than 15,000 secondary users who made use of …

… By studying the structure and function of a cyanobacterial protein, researchers have new … has some amazing resources and people — not just the instrumentation — but the experts we were able to work with on … of Science User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …

… the opportunity to pursue part of their thesis research at one of the DOE national laboratories or national user … and metabolism, work on which she will expand with her study of microbes in California’s manmade water transport … lab at the University of Texas-Austin. Rambo will be studying the influence of viruses on carbon cycling in …