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Metabolomics Technology Group
Our lab is using mass spectrometry based metabolite profiling to provide … the distributed and dynamic metabolite networks of environmental microbes and how they transform their environment. Research Team    … For further details, please reach …
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JGI Earth Month: Wetlands Work in #TenHundredWords
April marks both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As … Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant … and metabolism, work on which she is expanding with her study of microbes in California’s manmade water transport …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the … outline the questions they asked – and answered – in the study that recently appeared in the Proceedings of the … climate resilient switchgrass for bioenergy production. Building on the framework provided by our new switchgrass …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
Program was brimming with excitement and determination as they came onsite. From data carpentry to science … in Gold Sandra Hernandez Gonzalez and mentor Hualan Liu, Building Expression Host in Bacilli Class using CRAGE … able to talk to people that are working at the lab, my coworkers and I also wanted to know what it’s like to work …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … proposals have been accepted from 70 full submissions based on 92 letters of intent. Additionally, 40 percent … call. Richard Dick of The Ohio State University aims to study plant drought resilience in the Sahel, an arid region …
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Better Genome Editing for Bioenergy
… technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput … engineer organisms for bioenergy applications. Cas9 needs guide RNA to lead it to the correct sequence to snip — but … I will spend the first four sharpening the axe.” In this study,  published in  Metabolic Engineering , a team of …
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When “The Blob” Made It Hotter Under the Water
Data from marine heatwave event may foreshadow climate change impact on marine microbial communities. The Science A team of … as “The Blob.” The event was recorded during a long-term study of microbial communities in the northeastern subarctic …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… other forms of  Chloroflexota that adapted to marine environments hundreds of millions of years ago.  The Impact … chemicals not typically found in oceans or soils.  A recent study published in  The ISME Journal     focused on a class … possible flagella would be a liability in open water — requiring more energy for the bacteria to orient and swim than …
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2024 Progress Report
The Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome … from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab … algorithms to identify billions of protein sequences in metagenomes.  We continue to engage with our user community …
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Secondary Metabolites Advisory Committee
The SMAC is chartered by the Secondary Metabolites Program Head and report back to them. The Committee is chartered to render advice, guidance, and counsel on the effective management and strategic objectives of the …
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Fungal & Algal Program User Advisory Committee
… back to them. The Committee is chartered to render advice, guidance, and counsel on the effective management and strategic objectives of the … advisory panels and advocates of Program strategy, operations, and scientific relevance and quality. The Committee …
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Trent Northen
… is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had … programs using mass spectrometry for energy and environmental research, including through the Joint BioEnergy … available to JGI users.  Dr. Northen’s research is focused on using metabolomics to link genomes with environments to …
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