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Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in … technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …

… efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … for integrating metabolomics with genomic data (MAGI) for functional annotation and identifying unknown compounds … Sci Rep. 2013;3: 1656. … Education … Selected Publications …

… (scRNA-seq, Spatial Transcriptomics). … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic Institute (B.S., 2006) … List … of Cell Identity as an R package … Education … Selected Publications … Software …

… and enabling data-driven science. This is a group of computational biologists, bioinformaticians, computer … “grand-scale” scientific projects. These solutions include large-scale genome variants analyses, next-generation … metagenome binning software … Education … Selected Publications … Software …

Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and … Microbiology, Microbiome ; NSF Division Of Biological Infrastructure Program; NSF Postdoctoral Fellowship Program; … Futures … Metagenome Science Program … Education … Selected Publications … Awards and Service …

… the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the … 21, e3002083 Roux et al., 2021. Ecology and molecular targets of hypermutation in the global microbiome. Nature … Microbiology Resource Announcements … Education … Selected Publications … Awards and Honors …

Lab in 2008, Dr. Northen has had leadership roles within large DOE-funded research programs using mass spectrometry … to link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the … … Metabolomics Science Program … Education … Selected Publications … Awards and Honors …

Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI … Probing (SIP) Metagenomics pipeline  that reveals in situ functional activities of specific microbial groups within … dissertation in life sciences 2006 … Education … Selected Publications … Awards and Honors …

… bioenergy and environmental objectives. … BS – University of Arkansas, Fayetteville, Chemical Engineering Ph. D. – … State University, Bioengineering & Metabolic Biology … 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D … Google Scholar. … Education … Awards and Honors … Selected Publications …

… closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in … National Microbiome Data Collaborative where she leads infrastructure and user-centered design efforts. … PhD Applied … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …