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A Community Resource for Secondary Metabolite Researchers
… engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence … collaborate with each other in a public forum. Second, SMC provides an opportunity for users to publicly engage with …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… co-hosted a JGI Engagement: Accessing Resources at Multiple DOE User Facilities with a Single Proposal webinar, inviting researchers to apply for access to multiple genomics and molecular … support for students and academics? A:  JGI and EMSL do not provide scholarships or financial support, but they provide …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. Most … mechanisms of sex determination could also lead to new approaches to accelerate flowering, which can speed the … a partner with which to homologously recombine. Palindromes provide an alternative; because of their internal sequence …
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Fungal genomes mining to discover novel sterol esterases and lipases as catalysts
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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription factors with their target … regulation is critical to ensuring genes vital for growth and survival across various environments are … gene. These bacterial RNA polymerases are made up of a core enzyme complex as well as a sigma factor. While all bacteria …
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JGI Workshop at SIMB NP Meeting
Jan. 7: New Capabilities to Study Secondary Metabolism   Although … biosynthetic logics to be understood, accessing these untapped metabolic capabilities is often tedious and resource intensive. This is often due to, for example, tight regulation of biosynthetic gene clusters …
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI researchers … of innovation could look like. In one article, Micro-Scale Applications head Rex Malmstrom and Metagenome Program head … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Busting the Unbreakable Lignin
New evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main … to tackle when it comes to breaking down a plant for energy: Cellulose, hemicellulose and lignin, …
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David Goodstein
With a background in experimental and computational surface physics, Dr. Goodstein … the Phytozome Plant Genomics web portal. … BS in Physics, New York University, NY M.S in Physics, Cornell University, … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
…   On November 3, 2021, the JGI and the Workforce Development & Education department of Lawrence … institution, one of which may be a graduate student. Applications are solicited annually for the summer term (May …
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2023 Progress Report
Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, large-scale data, and …
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