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… In a special issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer perspectives on what the next five years of innovation … has advanced drastically, aided by genome assembly from metagenomes. This is a critical step toward better …

… JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to leverage …

… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The … genomes, researchers were able to carry out a broader analysis than had ever been done before to look at how … The project was funded by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …

… data set will help identify how different elements of the ecosystem interact and respond to changes in the … is 25 terabytes in size. Resources for genomic sequencing, analysis and characterization were provided by the U.S. … Laboratory (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic …

… genomic approach to bioprospecting. The Science One of the most vital pieces of equipment for fly fishing is a boxful of lures. Designed … cells into several small pools, followed by whole genome amplification and shotgun sequencing. The team first tested … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …

… JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Why … A:  For every genome that we sequence, we provide full analysis (assemble, annotate, work on initial analysis) and …

… trigger highlights efficiency for users requiring multiple omics methods to examine microbial chemical … chemical factories. They hold genetic blueprints for dozens of complex compounds, but stay largely dormant under … bioproducts. This study offers a template — integrative analysis of multiple omics data from various environments — …

… Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth rates and carbon consumption of SAR11 bacteria, the most abundant bacterial group in the …