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Access to Rock Star Scientists
… the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, Akshay Paropkari, Vicente Ramirez and … their work delivered during the 5th anniversary celebration of the internship program. Candace Cole, UC Merced JGI … their work. It’s fun to be around people who are generous with their time and like nerding out about the big stuff, …
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New Research Sheds Light on Diversity in the Deep Sea
… for bioenergy.   The Science Hydrothermal vents are ocean-floor openings in the Earth’s crust that emit hot, … get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. … seeps through cracks in the Earth’s crust and reacts with very hot rocks below, becoming an extremely hot, …
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Gut Fungi: Unexpected Source of Novel Chemicals
… from herbivore poop make surprisingly complex compounds — an energetically expensive feat thought to be too costly for … The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest … in their hunt for anaerobic fungi. By growing extracts without oxygen in ruminant fluid — which smells terrible …
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Computationally Classifying Fungal Lifestyles
… genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that “taught” a computer how to classify 101 … includes fungi that obtain nutrients from decaying organic matter (saprobes), and many plant pathogens known to …
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The JGI Data Portal: Improving User Experience
The human-centered, agile collaboration between the JGI and the … from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal is a … , IMG , GOLD , MycoCosm , and PhycoCosm , serve researchers with unique areas of focus and data and computational needs. …
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JGI@25: Fueling Investigation into Methane-Making Microbes
In honor of the JGI's 25th anniversary in 2022, we have revisited a … livestock — specifically, from the methane-making microbes within their rumen. There is another climate-minded reason …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) marked the visit of an esteemed interdisciplinary delegation from the University of Duisburg-Essen (UDE), Germany with the aim of intensifying collaborations in the fields of …
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Ray Turner Completes Last Tour of Lab Duty at JGI
For the last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that … as a typical monthly JGI All-Hands Meeting, after a couple of perfunctory items, the agenda went off the rails – … home office (garage). There, standing at a safe distance, with proper face covering, was JGI’s Administrative Services …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close to … how microbes might be influencing its health.  He sat down with me to talk about his project, and riffed a bit on what …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
Ancient  Chloroflexota s ditched their flagella and other traits when … are bacteria that act like tiny natural engineers with special skills to break down pollutants and recycle … study published in  The ISME Journal     focused on a class within  Chloroflexota called  Dehalococcoidia . Some  …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… below, captions are available) spotlighted the metabolomic analysis capability available through the  Community Science … (CSP) . This includes mass spectrometry-based measurements of primary and secondary metabolites from plants, … and Ben Bowen of the  JGI Metabolomics Program , along with Jenny Mortimer, Director of Plant Systems Biology at …
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Training the Next Generation of Talent
DOE JGI, UC Merced Days after presenting the results of his summer research at the U.S. Department of Energy … (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus at the University of … JGI researcher, Zhong Wang, have adjunct faculty positions with the SNS, and Wang’s group was hosting another QSB …
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