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The relationship between gene traits and transcription in soil microbial communities varies by environmental stimulus
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a methylthio-alkane reductase system, researchers could open avenues for using bacteria to produce ethylene and more.  Microbes excel at recycling … they worked with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… Kaushal Sharma, one of five Antioch High School rising juniors who participated in internships at the DOE Joint Genome Institute this summer through the Biotech Partners … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates …
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Doubling Down on Known Protein Families
… exploring a dark room with a flashlight, only able to clearly identify what falls within that single beam. When … online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … of scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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JGI Workshop at SIMB NP Meeting
… Jan. 7: New Capabilities to Study Secondary Metabolism   Although there are still a large number of secondary metabolites yet to be discovered and their … a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from …
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The genome of wine yeast Dekkera bruxellensis provides a tool to explore its food-related properties
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The mitochondrial genome of the ethanol-metabolizing, wine cellar mold Zasmidium cellare is the smallest for a filamentous ascomycete
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core … users and their science including technical capabilities offered, proposal review procedures and the annual meeting. …
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Nikos Kyrpides
… Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes … BA in Biology, Aristotle University of Thessaloniki, Greece PhD in Molecular Biology and …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But … of infecting different host species? Or, do they tend to specialize, infecting just a single host? Another wrinkle … lysogeny, they can insinuate themselves inside the host’s genome, living quietly and replicating with their host …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … coherent pieces called contigs — into genes and even into genomes — from these environmental samples,” said Matthias … of the tools that are available these days and that are widely used by many, many scientists.”  Using samples of …
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Nigel Mouncey
… Dr. Mouncey joined the DOE Joint Genome Institute in 2017 as the fourth Director in its 27-year history. He has a wealth of managerial experience from almost 20 years in the … JGI Director. Click to learn more about the program's areas of focus, major initiatives and more.  …
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