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Team Science Reveals Important Protein in Poplar
… (BNL) led a team that  identified a protein , PtrbHLH011, within poplar involved in plant growth, lignin production, … Described as the “DOE Tree,” poplar is considered one of the  Flagship Plants for the U.S. Department of Energy … walls (biosynthesis), and integrating molecules that combat infections. When the  PtrbHLH011 gene was knocked out in …
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JGI Launches Latest Strategic Plan
… For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one … JGI supports, include JGI’s emerging leadership role in a Microbiome Data Science effort (pages 37-39) and the … 47-49). “Our hope is to circulate this document widely within the Biosciences Area and among our Berkeley Lab …
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Extracting the Secrets of Secondary Metabolites
… survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and … the researchers used CRAGE-CRISPR for discovering active secondary metabolites and helping them identify and … to identify strains able to produce secondary metabolites within a lab environment, shining a light into this …
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Genome diversity in Brachypodium distachyon: deep sequencing of highly diverse inbred lines
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Identification of beneficial and detrimental bacteria impacting sorghum responses to drought using multi-scale and multi-system microbiome comparisons
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Metagenomics-resolved genomics provides novel insights into chitin turnover, metabolic specialization, and niche partitioning in the octocoral microbiome
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What Happens Underground Influences Global Nutrient Cycles
… for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user … that may be relevant to both algae and land plants.  Within the biogeochemistry group, one of the four proposals … on an aspect of the  Phenotypic Response of the Soil Microbiome to Environmental Perturbations   under PNNL’s …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… A two-day kick-off meeting held at Lawrence Berkeley National Laboratory … research. The meeting involved key representatives from the ACTIVE SITES Research Center (ACSI), the Centre for Water … are excited to continue our fruitful collaboration in the microbiome space that has resulted in many impactful papers …
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IMG/VR
… JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also …
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Genome organization and botanical diversity
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Unveiling plasmid diversity in nature
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Natural soil microbiome variation affects spring foliar phenology with consequences for plant productivity and climate‐driven range shifts
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