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… develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program .  Representative software includes: gRNA-SeqRET , an organism-agnostic CRISPR gRNA design tool BOOST , which provides a suite of … and associated tools, which track samples through the JGI’s Synthetic Biology pipeline as well as provide process …

… and without an inoculation of the  M. elongata strain PM193 added to a diluted soil mixture, publishing  the results … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  … Ecosystems (ARBRE) (ANR-11-LABX 0002 01 to F. Martin), JGI Community sequencing program project (CSP570, …

HT-SIP is a capability available to request through  the JGI proposal calls . … Work at Lawrence Livermore National … of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported … of Energy operated under Contract No. DE-AC02-05CH11231. …

Research Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential genes responsible for lignin deconstruction. (The JGI also conducted RNA sequencing and alignment to the … (MAO), Institute for Collaborative Biotechnologies grants W911NF-09–D-0001 and W911NF-19-2-0026 (MAO), US Army Research …

As set out in the JGI Five-Year Strategic Plan – “Beyond Basepairs, A Vision … to the resources and disciplines advanced by the JGI, we seek to inspire more students to enter the science, … and inclusive pool of talent for career opportunities at JGI and Berkeley Lab. …

Over the years, hundreds of interns have come to the JGI from all parts of the globe to gain lab experience and … they’ve all mentioned how invaluable their time at the JGI was and how great it was to have an experienced career …

… his dissertation. Some of his research was conducted at the JGI through the DOE Office of Science Graduate Student … or national user facilities. Baker had worked with the JGI through a Community Science Program (CSP) proposal, and … opportunity for me to get real-world experience.” As he finalizes his dissertation, he noted his time with the JGI …

In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These … available for future research. Hear from Rekha Seshadri (JGI) and Matt Escobar (California State San Marcos) about …

Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines custom flow cytometric … cell sorting, genome amplification, PCR screening, and 16S sequencing. She also develops novel flow cytometry …

… catch: SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible … multiple teams and analyses. This episode, Rex Malmstrom (JGI), and Roli Wilhelm (Purdue University), share a few …

My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable …