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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) marked the visit of an esteemed interdisciplinary delegation from the … in many impactful papers in recent years, but are also looking forward to jointly expanding into new areas of …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and … microbes involved in the digestion process.  “We wanted to find the enzymes that make the rumen such an efficient …
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Refining the Process of Identifying Algae Biotechnology Candidates
… [subhed -- copy to summary above^ as well ] The Science The recipe for … of Energy’s work toward developing a clean energy economy is developing alternative sustainable fuel sources. … a series of experiments on the Scenedesmus strain to find out how well it performed under varying temperature …
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Sequencing Technologies & Products
…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. This includes scaling the technologies and … An assay used for profiling transcription factor binding sites across entire genomes. This technology has …
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Whole-Genome rVISTA: a tool to determine enrichment of transcription factor binding sites in gene promoters from transcriptomic data
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The Essential Role of the N-Terminal Domain of the Orange Carotenoid Protein in Cyanobacterial Photoprotection: Importance of a Positive Charge for Phycobilisome Binding
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Comparative Biochemical and Structural Analysis of Novel Cellulose Binding Proteins (Tāpirins) from Extremely Thermophilic Caldicellulosiruptor Species.
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Contribution of calcium ligands in substrate binding and product release in the Acetovibrio thermocellus glycoside hydrolase family 9 cellulase CelR
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Phylogenetically distinct fungal expansins show different binding preferences towards cellulosic materials and enhance cellulase activity
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Secrets of the Needles: What Microbes do on Conifer Leaves
… processes. The Science In a recent Microbiome paper , scientists focused on the conifer needle microbiome. The … of conifers–limber pine, Douglas fir and Engelmann spruce–to learn more about conifer needle microbiomes. The survey … Robert Bowers . She contributed to the analysis of mobile genetic elements across all of the metagenomes. Learn more …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… Researchers looked across many organisms to see that aminotransferase enzymes have evolved … to core nitrogen metabolism, this team built a phylogenetic tree using bioinformatic software called FastTree … separately for billions of years have some common signatures of muli-substrate specificity. However, different …
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Gamete expression of TALE class HD genes activates the diploid sporophyte program in Marchantia polymorpha
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