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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… A Comparative Analysis of Metabolic Pathways in Fungal Pathogens Shayna Bennett and mentor Robert Bowers, Mobile Genetic Elements and CRISPR Spacers in the Conifer Needle … : So while here at the JGI, I’ve been studying mobile genetic elements and CRISPR spacers in the conifer needle …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… or life-saving drugs. A better understanding of its genetic complexities will illuminate the evolutionary … is passed along to offspring supplying it with raw genetic materials and increased genome complexity, made … demonstrated the potential of ferns as sources of novel genetic material with applications including ecological …
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How Filamentous Fungi Sense Food
… Fungus” and that are publicly available at the Fungal Genetics Stock Center. This work was supported by an Energy …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… as reliable markers for classifying species and studying diversity in complex biological systems. By making the tools … due to features like self-splicing introns and multiple genetic codes. Adding to the challenge, mitochondrial …
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Tracking the Origins of Methane-Producing Microbes
… of a novel archaeum from a hot spring that has the genetic machinery to perform hydrogenotrophic methanogenesis … study first author Bojk Berghuis. “This provided us with genetic evidence to tie together the evolutionary history of …
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Six join FICUS program in 2026
… call aims to encourage innovative research exploiting a diversity of capabilities to generate datasets beyond what …
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Eelgrass Proves to Be Much Younger Than We Thought
… a timeline like this, researchers would normally craft a genetic clock based on its divergence with a  different … researchers to use the genome assembly to calibrate their genetic clock.  Various researchers around the globe were each working on their own genetic clock to discover when eelgrass established itself …
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The Expanding Universe of Methane Metabolisms in Archaea
… in nearly all types of anaerobic environments suggest the diversity of methane metabolisms is “vastly underestimated.” … these results show a striking case of how metabolic diversity can emerge from tinkering of a common set of … on “Exploration of Metagenomic Data to Understand the Diversity and Evolution of Methane Metabolisms” at the …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… sample, or a rumen sample, you’re going to find beautiful diversity.”  Within that diversity of bacteria and fungi, O’Malley and her team are …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… domesticate some 60 strains, inserting into them a genetic sequence that acts as a “landing pad.” Mouncey adds, … genome-editing tools, and reporters.” JGI-developed genetic engineering technique CRAGE lands the cover of ACS … BGCs, JGI scientists could relieve BGCs from their former genetic repression, enabling scientists to see what …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… to regain once it is lost. Depending on the exact phylogenetic placement of Olpidium, it may mean that the … This required an enormous amount of effort in collecting genetic material of Olpidium. They inoculated cucumber roots … both the DNA and RNA samples turned out to be a mixture of genetic material with various origins, ranging from fungi, …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… recognized Woyke as a pioneer in uncovering the hidden diversity of “microbial dark matter”–that uncultured and …
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