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JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have revisited a … is a single-celled alga with a unique place in evolutionary history. Retaining ancestral features of both … lab and second author on the paper, studied viral genetics and gene therapy before self-training himself as a …
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Hiroshi Otani
… technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … which metabolites. … BS, Engineering, Tokyo Institute of Technology Master's, Biotechnology, University of Tokyo PhD, Biotechnology, University of Tokyo … Kunakom …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and functional … Microbial Genomes group is focused on:  Developing state-of-the-art data processing and analysis pipelines for the …
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How to Target a Microbial Needle within a Community Haystack
A workflow for capturing the genetic make-up of specific uncultivated microbes from complex environmental … including gathering a more complete view of a population’s genetic makeup and identifying viruses interacting with …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators peer through the waters and clouds of insects hover just above. Described as a “river of grass” … ranging from wetlands to tree islands to cattails. In 2018, the US Department of Energy (DOE) Joint Genome …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
JGI interests in algae and secondary metabolites. A total of 27 proposals have been  approved through the annual  Community Science Program (CSP) call of the U.S. Department of Energy (DOE) Joint Genome … generating their  genome sequences to improve breeding by genetic improvements. Apomixis is asexual reproduction …
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The Mutualist Laccaria bicolor Expresses a Core Gene Regulon During the Colonization of Diverse Host Plants and a Variable Regulon to Counteract Host-Specific Defenses.
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A Step Toward Controlling Soybean Rust
… causes Asian Soybean Rust (ASR) and is the major pathogen of soybean. Left uncontrolled, soybean rust could reduce crop yields by as much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio , Sebastien Duplessis of the French National Institute for Agricultural Research …
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JGI@25: Strengthening Soybean
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … “All along the way, it was just like rediscovering genetics, with the evolution of sequencing technologies and …
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Ben Bowen
… bioenergy and environmental objectives. … BS – University of Arkansas, Fayetteville, Chemical Engineering Ph. D. – … & Metabolic Biology … 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D 100 Winner 2014 Berkeley Lab … T., Ruebel, O., Northen, T., & Bowen, B. (2015). Analysis of metabolomics datasets with high-performance computing and …
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Defining the Sphagnum Core Microbiome across the North American Continent Reveals a Central Role for Diazotrophic Methanotrophs in the Nitrogen and Carbon Cycles of Boreal Peatland Ecosystems
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Extracting the Secrets of Secondary Metabolites
… survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and … is a technique researchers can use to integrate large genetic payloads directly into diverse microbes. Combining …
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