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UC Merced Interns Reflect on Their JGI Summer Projects
… students from UC Merced worked closely with JGI scientists on research projects that contribute to the larger mission of the U.S. Department of … due to COVID-19 restrictions, but virtual events and technology enabled a fruitful experience for mentors and … Intern: Sidharth Babu (undergraduate) Mentor: Zhong Wang Click the image to watch the video …
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JGI Scientists Pen Genome Watch Articles
… of Science User Facility located at Lawrence Berkeley National Laboratory, are sharing their expertise in … characterizing the human microbiome  by its genomes and metagenome , rather than just by 16S ribosomal RNA gene censuses.  Emiley Eloe-Fadrosh ,  Metagenome Program lead, shone a spotlight on  ammonia …
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Cultivating Symbiotic Antarctic Microbes
… Nanohaloarchaeota cultures reveal they are symbionts and not free-living organisms. The Science Researchers … consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples … The researchers then pursued the Nha-C strain for further study, tagging the cells with individual fluorescent probes. …
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How Microbes Can Protect Plants in Drier Straits
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… strategic plan outlines how the JGI will advance the bioeconomy, leveraging partnerships to advance foundational … will bridge fundamental knowledge gaps to advance biotechnology and biomanufacturing.  As a leader in genomics … as well as collecting extensive input from all JGI staff, Biosciences and Berkeley Lab leadership, JGI advisory …
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DAP-seq Drives Robust Mapping of Gene Regulation
… assays yield an unprecedented view of plant evolution and adaptation.    Understanding how genes are regulated … hard to make them work for the kinds of plant samples we study — and even go beyond, putting four different species … broad applicability extends beyond plants. Currently, this technology is available to JGI users for studies on …
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JGIota: A Surprise for Chloroflexota — The First Flagella!
… To understand how organisms adapt to extreme environments, Marike Palmer and Brian Hedlund study organisms living in hot springs. Hear how their recent …
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the … aligned with light availability. A long-running time-series study offers a first glimpse into a full season’s cycle of … period and sent to JGI for metagenomic sequencing. A study  recently published in  Microbiome shows that the way …
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Taking Stock of the Known and Unknown Microbial Space
… of Science User Facility located at Lawrence Berkeley National Laboratory Berkeley Lab), have taken stock of the … sequence data generated over the past three decades, their study assesses what fraction of the microbial diversity we … genes on nearly 2 million genomes, including isolates, metagenome-assembled genomes (MAGs) with varying quality …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health and environmental processes. The Science In a recent Microbiome paper … the analysis of mobile genetic elements across all of the metagenomes. Learn more about her time at the JGI here . …
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Year in Review: JGI’s 2018 Progress Report Available Now
… The latest edition of the JGI Progress Report highlights notable research and scientific collaborations in 2018. The cover is an image of Mono Lake, a saline soda lake east of California’s Yosemite …
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Tomas Tyml
… Tomas uses traditional cultivation methods along with microscopy and genomics to study endosymbiotic associations within microbial …
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