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Mike Sneddon
… a laboratory information management (LIMS) system. He previously led the NGS Software team and metagenomic data platform … library and natural product discovery platform. WO2021163637A1 , PCT application PCT/US2021/018050 (published 2021). Arkin, AP, et al. KBase: The …
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Open Frameworks Training the Next Generation of Scientists
… participants. Over the past two years, Myco-Ed has been used in 15 individual classrooms across the country, training 316 … DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, and the DOE Systems Biology Knowledgebase … ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported by the Office of Science of the …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
… to date.  This summer internship program, which began in 2014, pairs undergraduate and graduate students from UC Merced … The 2020 JGI-UC Merced interns and mentor/s: Brendan Blasius & Guohong “Albert” Wu Edgar Jimenez & Sharon Greenblum … Li Lei and Virginia Scarlett Jasper Toscani Field & Brian Bushnell Lesly Lopez & Li Lei Lorenzo Scaturchio & Benjamin …
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Triggering Morel Fruiting
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on just how morel fruiting is triggered when nutrients are … from an external source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … proposals come from investigators who have not previously been a principal investigator (PI) on an approved JGI … with 600 instructors worldwide who work with more than 10,000 undergraduate students each year. Brian Looney of …
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JGI@25: Solving the Mystery of the Missing Oil
… between.” To find an explanation, his team tracked the thousands of bacterial and archaeal species using a DNA-based array developed at Berkeley Lab. Over the … described the early efforts in his keynote talk at JGI’s 2011 Annual Genomics of Energy & Environment Meeting: “What we …
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JGI Interns at UC Merced Earn CAMP Merit Awards
… between DOE JGI and UC Merced to promote diversity and inclusion in science and research, two undergraduate students … technology, engineering and math (STEM) fields. At the 2016 CAMP Statewide Undergraduate Research Symposium , held … From the 99 students who attended, representing 9 UC campuses, 10 special merit posters/presenters and 10 honorable …
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JGI User Executive Committee Expands
… Six new members have been elected to the User Executive Committee (UEC) of the U.S. Department of … Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … on dead wood decomposition. She’s also participated in the 1000 Fungal Genomes Project and has an interest in …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… This webinar focused on how the JGI employs single-molecule, long-read DNA … for PacBio? A(nswer):  Regular PacBio typically requires ~ 1.5-10 ㎍. Low-input protocols are continuously improved, but currently require input in the ~ 30 – … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… As warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to … by prokaryotes (microorganisms without a defined nucleus). Colder waters nearer the poles, however, tend to favor … are.” But according to a new study published September 16, 2021 in Nature Communications , warmer waters and …
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Dan Rokhsar
… group, and is past lead of the Eukaryotic Genome Program (2010-2019), and JGI Chief Informatics Officer (2013-2016). Dr. … and evolutionary biology. Dr. Rokhsar’s research is focused on understanding the origin, evolution, and diversity … developmental biology. In addition to this evolutionary focus, his work on plant genomics is targeted towards the …
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JGIota: A Surprise for Chloroflexota — The First Flagella!
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