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Abundant and active community members respond to diel cycles in hot spring phototrophic mats
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Metagenome-assembled genomes from microbial communities producing lactic acid from dairy residues
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Variability in depth-mediated shifts in methanogen and methanotroph communities across tropical Andean mountain peatlands
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The relationship between gene traits and transcription in soil microbial communities varies by environmental stimulus
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Methane-fed microbial communities enriched from field-grown rice support diverse heterotrophic bacteria
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Alabama A&M Interns Access An Abundance of Knowledge
… an internship program to bring students to the JGI for research training experience. Enabled by the DOE … Ti’Yanna Watson and graduate student LaMonika Dent worked with JGI mentors Yi Zhai and John Vogel on researching the … Ti’Yanna Watson: The best part about interning here is the community aspect. Everyone here has also been so very nice …
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Promoting the Power of Viral Metagenomics
… summarizing the field of viral metagenomics, authored by JGI researchers Lee Call,  Stephen Nayfach and  Nikos … published in the journal  Annual Review of Biomedical Data Science . The following guest piece was written by Call, a … data it is possible to answer a wide variety of important questions such as which organisms the viruses may be …
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When “The Blob” Made It Hotter Under the Water
… carbon from the atmosphere and keeps it in the deep ocean. With genomic samples collected before, during and after The … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Lab), as part of Hallam’s approved proposal through the Community Science Program . The proposal focuses on …
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The Case for Conservation
… “older than dinosaurs” could help improve crop yields.  The Science The fire moss Ceratodon purpureus is a short plant with a complex genome . Now, high-quality reference genome … to evolve so rapidly in gene content and structure. He and JGI Plant Program head Jeremy Schmutz already see how …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species decompose … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Genomes that Paved the Way This project stems from a Community Science Program proposal that Martin submitted in …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… changed dramatically over the last  25-plus years since the JGI’s inception, making it possible for researchers to get a … (Berkeley Lab) describes it, JGI researchers have also collaborated to advance computing infrastructure and … such tools has been a collaborative effort. For example, with support from the  Exascale Computing Project , the JGI …
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Busting the Unbreakable Lignin
… fungi can degrade the hardiest of plant components   The Science There are three main ingredients to tackle when it … anaerobic fungi could be used to effectively modify lignin without oxygen and make use of it, it would change the … Research Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential …
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