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The exceptional form and function of the giant bacterium Ca. Epulopiscium viviparus revolves around its sodium motive force
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Doubling Down on Known Protein Families
… the collective power of more than 26,000 microbiome datasets, all accessible through the publicly available  … unique makeup of microbe players and the functions they perform, artificially replicating a whole community is … majority of these protein families belonged to bacteria and viruses, though 6 million of the sequences evaded …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… the microbes that play roles in the methane cycle. Their data report, which provides the only known reference microbiome data sets for the Loxahatchee Refuge,  was published in the journal  Environmental Microbiome . “Before JGI was involved, I was not sure we could even complete …
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Supercharging SIP in the Fungal Hyphosphere
… and fungi The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial communities, with results published … biodegradation, with potential applications in industry and biotechnology for the production of  clean energy . Summary …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
On September 1, JGI held a JGI Engagement: Pro Tips for Successful Community Science Program (CSP) Applications … to submit white papers to the CSP  New Investigator call for proposals.  Tips: Contact us with your questions … to make sure the goals, experimental design, and plan for data utilization are clear. Contact JGI staff for feedback …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new … RNA to understand gene expression, and developed new tools to map that soil RNA to fungal genomes.  The U.S. …
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Understanding Wildfire Recovery, Starting in Soil
The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the … — mainly actinobacteria, as well as proteobacteria, bacteroidata, and patescibacteria. A major strength of this kind of …
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a … that colonizes Brock and gives him super strength. For lichen, the partnership is more commonplace — though … variation in its progeny. The study’s transcriptomic data also identified many genes potentially important for …
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JGI Launches Latest Strategic Plan
For the Joint Genome Institute, the end of 2018 was marked … quadrillion nucleotide bases of DNA sequence to the public data repositories over its now 20-plus-year history. In … newest 5-Year Strategic Plan: Beyond Basepairs — A Vision for Integrative and Collaborative Genome Science , the …
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JGI Workshops at PAG
… genomics technologies, keen interest in the bioenergy and biotechnology potential of algae, and sampling of the length … diversity, the numbers of sequenced algal genomes, and the quality of those genomes, is rising. The purpose of this … hear from researchers who are applying genomic sequence information to BER funded activities of plant systems. We will …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… 2019, the JGI’s Yasuo Yoshikuni and his team  announced in  Nature Microbiology an important addition to the synthetic biologist’s toolkit: a technique for  c hassis (or strain)-independent  r ecombinase- a …
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Project Management Office
… help with: preparing a Statement of Work, completing a formal User Agreement, and ultimately launching the user’s project. See below for details on each step. … Please review our FAQ in advance … of samples for sequencing, or the submission of sequencing data for synthesis – the DOE requires that all work …
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