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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… going forward. Watch this short video (below) to hear more about the summer from their own perspectives. The interns … JGI mentors are listed below, along with their project focus areas: Undergraduate Interns Andrew Lin and mentor Vy … career as well. Morgan Lavenstein Bendall : The best part about interning here is that I get to meet a lot of …
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SPRUCE-ing Up Science
… of biology and computer science, to reveal clues about how microbial and bacteria communities influence the … places like Minnesota for example, despite taking up only about 3% of the planet’s landmass, peat moss and their … on his PhD program at UC Merced in 2013, this field was just beginning to develop and expand into the world of …
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2025 Progress Report
… how their laboratory and data science efforts support users, advance foundational science and enable biotechnology … Mission  As a U.S. Department of Energy Office of Science user facility supported by the Biological and Environmental …
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Supercharging SIP in the Fungal Hyphosphere
… have successfully automated aspects of a commonly-used process for studying microbial communities, with … The Impact Stable isotope probing is a long and laborious process — as well as a key way scientists study microorganisms. Because microorganisms live in complex communities, like within …
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JGI-UC Merced Interns Share Their 2021 Experiences
… working virtually with JGI mentors to investigate rigorous research projects, hone science presentation skills, and … returned to re-engage with their mentors from the previous year and continue working on their research project! The … foster a diverse future workforce in science. To learn more about each intern’s experience during their internship, …
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Tracking the Origins of Methane-Producing Microbes
… the total global methane production. They are thought to use billions of tons of the carbon dioxide trapped in … on the global carbon cycle. All methanogenic archaea use one of three pathways for methanogenesis: … and, acetoclastic. All three pathways require the gene cluster for methane production known as Mcr. Until recently, …
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Mapping Heat Resistance in Yeasts
… species to grow better than its closest relative S. paradoxus at high temperatures (39°C/102°F). The Impact One of the … DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility of Lawrence Berkeley National Laboratory, aim … a way to map associations between genotype and phenotype using a strategy called reciprocal hemizygosity analysis via …
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Len Pennacchio
… Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to … at Stanford University where he uncovered the genetic cause of a rare form of human epilepsy and subsequently generated one of the first mouse models for this common neurological disorder. In 1999, …
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Alabama A&M Interns Access An Abundance of Knowledge
… fellow interns and scientists alike. Want to learn more about their experience? Watch the short video below. Video … fall for my master’s in plant soil science and my career focus is plant breeding. Ti’Yanna Watson: My mentor is Dr. Yi … a JGI intern has been just the accessibility to an abundance of knowledge. There’s so many scientists here that are …
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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data quality. The Science Through … technologies and computational approaches, more and more virus sequences are being recovered and identified from … tail – they individually decide that the elephant is either dangerous, akin to a carpet, or a harmless piece of rope. …
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PolyCRACKER, a robust method for the unsupervised partitioning of polyploid subgenomes by signatures of repetitive DNA evolution
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Trichodesmium genome maintains abundant, widespread noncoding DNA in situ, despite oligotrophic lifestyle
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