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The Power of One, Amplified
… genomics can add significant value to the other commonly used culture-independent sequencing approaches including … sequencing technologies and bioinformatic tools have helped decode the genomes of tens of thousands of previously … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected … Program, and coordinates the development of the virus and plasmid workflows for the National Microbiome Data …
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How Maize Makes An Antibiotic Cocktail
… a family of compounds that protects it against infections — using surprisingly few enzymes. The Science Maize ( Zea mays … But zealexins are almost completely limited to maize. By deciphering the zealexin synthesis pathway, this study makes … as  Sorghum bicolor — a  candidate bioenergy feedstock and  JGI Flagship Plant — could produce at least 15 zealexins. …
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Making a Lichen Together
… time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership more clearly. … and nitrogen fixers in alpine and high latitude ecosystems, deciphering their internal molecular mechanisms can help … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and …
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A SNP resource for Douglas-fir: de novotranscriptome assembly and SNP detection and validation
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De novo Nanopore read quality improvement using deep learning
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Hybrid error correction and de novo assembly of single-molecule sequencing reads
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Assemblathon 1: A competitive assessment of de novo short read assembly methods
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Plant–microbiome interactions: from community assembly to plant health
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Hardwood Tree Genomics: Unlocking Woody Plant Biology
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An Insect Herbivore Microbiome with High Plant Biomass-Degrading Capacity
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Visual Comparative Omics of Fungi for Plant Biomass Deconstruction
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