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Atypical Divergence of SARS-CoV-2 Orf8 from Orf7a within the Coronavirus Lineage Suggests Potential Stealthy Viral Strategies in Immune Evasion
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Honey Bee Gut Microbiota Divvy Up Dinner
… Honey bees are invaluable pollinators — cupids of the plant world facilitating the remixing of genes in the next … of the National Academy of Sciences . The team focused on the dominant bacterial clades shared between honey … appears to be happening is a kind of movable feast being deconstructed as it goes through the honey bee gut. Early …
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Accelerating Metagenomics Discoveries with Deep Learning
… workshop, Volkan Sevim, a computational biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector representations of … that low sequence identity may belie. The technology he’s using is magical; transform any length of amino acid …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… developed to help inform scientists and researchers more about the patterns and functions of environmental microbes. Researchers can use the tool to correlate protein annotations with ratios of … mSystems paper , a team at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Learning to Look
… Machine learning approach significantly expands inovirus diversity. To answer the question, “Where’s Waldo?” … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an algorithm that a computer could …
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Supercharging SIP in the Fungal Hyphosphere
… have successfully automated aspects of a commonly-used process for studying microbial communities, with … most widespread type of mycorrhizal fungi, live within a plant’s root system. They form mutually beneficial … HT-SIP is a capability available to request through  the JGI proposal calls . …
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Six join FICUS program in 2026
… The JGI is excited to welcome six to the Facilities Integrating Collaborations for User Facilities (FICUS) program for fiscal year 2026, in … what each facility could generate individually. Learn more about the projects below. …
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Back to the Future! A Sorghum Story
… were developed specifically to turn their biomass into sustainable biofuel and bioproducts. John Mullet, a biologist at Texas A&M University, tells us how sorghum’s historical — and literal — roots could play …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… microorganisms for biofuel production and other sustainable applications. Summary Hot springs are … A recent study published in  The ISME Journal     focused on a class within  Chloroflexota called  … a complex pattern of evolution for genes related to eating plant compounds in both the oceanic and hot spring  …
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Plant Pan-Genomics Comes of Age
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Plant Metabolic Network 15: A resource of genome‐wide metabolism databases for 126 plants and algae
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The F-Box Gene Family Is Expanded in Herbaceous Annual Plants Relative to Woody Perennial Plants  
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