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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… recognized Woyke as a pioneer in uncovering the hidden diversity of “microbial dark matter”–that uncultured and … Lab), Woyke currently serves as the interim deputy for JGI User Programs. Earlier this year, she was elected to the American Academy of Microbiology (AAM). She has led JGI’s Microbial Genomics Program since 2009 and heads the …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the algae-associated microbiomes that influence algal diversity and gene expression. Sailing from pole to pole on … their RNA transcripts. All sequencing was done through the JGI Community Science Program . Using an ecology metric …
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Forming Scientific Connections and Building Community
… The 11th cohort of JGI-UC Merced interns pick highlights from their summer … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, hosted three … at the recent JGI Annual Meeting. Through the DOE RENEW initiative, three of the interns – graduate students Peter …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately facilitates microbial genome … life. By leveraging massive user-generated datasets at the JGI and other publicly available data, GenomeOcean employs … foundation models. However, the sheer vastness of microbial diversity is not covered by reference genomes.”  Most of the …
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Fishing for Novel Cellulose Degraders
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … tool for microbial ecologists to learn more about the diversity of microbial enzymes, which could have a plethora … of potential applications to industrial processes. Summary JGI researchers developed a function-driven, single-cell …
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Tanja Woyke
… of User Program position in 2021. In addition to her JGI appointment, she also holds an Adjunct Scientist … to learn more about the program's areas of focus, major initiatives and more.  … provides direction, leadership and oversight for all of the JGI user programs, including the Community Science Program …
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Outreach Stories
… Interested in reading more JGI intern and mentor success stories? Read more below. …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… JGI researchers lend expertise to develop tools and data hub … impact the regulation of global nutrient cycles. The JGI’s latest strategic plan (download a copy  here ) … environmental samples to help uncover the phylogenetic diversity of the human gut microbiome. By bringing their …
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Micro-Scale Applications Group
… The JGI uniquely offers the first quantitative Stable Isotope … The JGI provides users access to cutting-edge cell sorting, DNA … additional functional insights into microbial genomes, the JGI now uses laser microdissection to selectively isolate …
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All Events
… The JGI is represented at conferences year round; find out where …
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Year in Review: JGI’s 2018 Progress Report Available Now
… The latest edition of the JGI Progress Report highlights notable research and … lake east of California’s Yosemite National Park, taken by JGI’s own Jon Bertsch. Microbes isolated from Mono Lake were sequenced by the JGI (isolates here , here and here ), and the data has been …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… Every year, the JGI sequences around 35,000 samples — from plants, algae, … the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …
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