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… sets, such as sorghum internode time course data from 4 different genotypes by Dr. John Mullet; Dr. Tom Juenger … additional biological information to an average of 40 percent of genes across Gene Atlas plants. Comparing …

… ran the gamut of sequencing technologies, from making a bacterial artificial chromosome library to long-read … This work was supported by NSF DEB-1541005 and start-up funds from UF to S.F.M.; microMORPH … and the University of Turku to S.O.; and NSF DEB1541506 to J.G.B. and S.F.M. The work conducted by the U.S. …

… By studying the structure and function of a cyanobacterial protein, researchers have new insights into how … are easy to point out. Plants, algae and cyanobacteria create the air we breathe and the fuel for food … a similar region —  a domain of unknown function, DUF2470. In the world of proteins, a domain of unknown function …

… A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct … with different lifestyles. The Science The bacterium SAR324 is unusually cosmopolitan. In the ocean’s North Pacific … community genomes and expressed gene transcripts (metagenomes, metatranscriptomes), as well as the genomes of …

… can be further purified to produce alternative biofuels. A C4 plant like sorghum and maize, sugarcane can grow on … To create this reference sequence, the team relied on bacterial artificial chromosomes (BACs), vectors that can … a single contiguous region. The JGI sequenced half of the 4,500 BACs sequenced for this project that were colinear to …

… S, Otani H, Udwary DW, Doering DT, Mouncey NJ. Cytochromes P450 involved in bacterial RiPP biosyntheses. J Ind Microbiol Biotechnol. … product galaxy. J Ind Microbiol Biotechnol. 2019 Mar;46(3-4):273-279.   Otani, H., Stogios, P.J, Xu, X., Nocek, …

… of how large-scale single cell genomics complements metagenomics studies. The Science Researchers demonstrated the … sequencing approaches including amplicon and metagenomic sequencing. For example, they showed that the … more moderate ecosystems. A few years ago, a candidate bacterial lineage was identified from microbial and …

… Metagenome-assembled archaeal genomes provide new insights … metabolisms is “vastly underestimated.” In the March 4, 2019, issue of Nature Microbiology , they mined the … “Distribution of predominant high-temperature archaeal and bacterial lineages in Yellowstone National Park,” as well as …

… entirely new capabilities through partnerships with bacterial symbionts, and how others revolutionized their … toward 10,000 annotated genomes, this infrastructure advantage becomes even more critical. With roughly half of all …

… starvation modulate root exudation. Science Advances, 2024 10(1), Schadt, C., Martin, S., Carrell, A. et al. An integrated metagenomic, metabolomic and transcriptomic survey of Populus … McGivern BB et al. Decrypting bacterial polyphenol metabolism in an anoxic wetland soil. …

… The JGI-UC Merced internship program was founded in 2014 with the goal of inspiring students to embark on a career … Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes … Making Big Data Metagenomic Clustering Scalable …