The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4)
Results
Homologous Recombination and Transposon Propagation Shape the Population Structure of an Organism from the Deep Subsurface with Minimal Metabolism
The crystal structures of the tri-functional Chloroflexus aurantiacus and bi-functional Rhodobacter sphaeroides malyl-CoA lyases and comparison with CitE-like superfamily enzymes and malate synthases
Extensive gene content variation in the Brachypodium distachyon pan-genome correlates with population structure
Genome-wide fitness profiling reveals molecular mechanisms that bacteria use to interact with Trichoderma atroviride exometabolites
A versatile toolkit for high throughput functional genomics with Trichoderma reesei
Nitrosococcus watsonii sp. nov., a new species of marine obligate ammonia‐oxidizing bacteria that is not omnipresent in the world's oceans: calls to validate the names ‘Nitrosococcus halophilus’ and ‘Nitrosomonas mobilis’
DNA methylation and gene expression regulation associated with vascularization in Sorghum bicolor
Hydrothermal Vents and International Science: A Postdoc’s Visit to the JGI
Sequence variants in the HLX gene at chromosome 1q41‐1q42 in patients with diaphragmatic hernia
DNA hypomethylation of the host tree impairs interaction with mutualistic ectomycorrhizal fungus
Metagenomes from two microbial consortia associated with Santa Barbara seep oil