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JGIota: Looking Back at Sequencing for Soybeans
… could boost biofuels and fertilize fields. So in 2010, the JGI helped publish the original genome sequence for the soybean, Glycine max. With a full genome sequence, … that work from researchers Gary Stacey (University of Missouri), Peter van Esse (The Sainsbury Laboratory) and …
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The Fungi That Survive In Antarctica
… are working with scientists from around the world – and the JGI – to understand them better. …
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Frederik Schulz
… and biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the … discovery pipeline and enrichment metagenomics for terrestrial protists. These approaches enable novel … 5 (1), 1-6 Google Scholar … Senior Editor, ISME Journal LBNL LDRD (Soil Protists) FY2022 LBNL LDRD (Viral …
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Microbial Genomics & Metagenomics (MGM) Workshop
The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics … Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and interpretation of sequence data. IMG/M is a web-based platform that provides access to the wealth of public microbiome …
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Toward More Efficient Artificial Photosynthesis
Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation … current natural processes and use it as a sustainable resource for making high-value bioproducts. As a step toward … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Zhong Wang
… in the Analysis R&D group focuses on developing new bioinformatics solutions to support JGI in adopting new genomics technologies, scaling up … science. This is a group of computational biologists, bioinformaticians, computer scientists and biostatisticians. …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
Back in 2011, JGI-supported researchers published a paper in the journal Science . It detailed how they’d used metagenomics to … genes. The data from that study is now used across California State University campuses for biotechnology education …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running smaller assemblies — so we head there for a sense of what this supercomputing looks like. …
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Gotta Catch 'Em Gall
… (UC Berkeley and the Joint BioEnergy Institute) are looking for new ways to engineer plants. So they’ve looked into … how this project unfolded, and how they worked with the JGI's metabolomics program to find out more about these …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… such as heat waves, droughts and floods. The planet’s resources are being stretched by a growing human population and increasing demand for agricultural products.  Sorghum bicolor (L.) Moench is … and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Streamlining Regulon Identification in Bacteria
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … regulation is critical to ensuring genes vital for growth and survival across various environments are … genes associated with a given transcription factor is resource-intensive and unscalable. To test the efficacy of …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core … compounds shared by most living creatures for energy, growth and reproduction—most organisms produce a … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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