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Lignin‐modifying processes in the rhizosphere of arid land grasses
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Extracting the Secrets of Secondary Metabolites
… survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and … with a powerful addition to their toolkit to study gene function. As a demonstration, the researchers used … metabolites and helping them identify and describe the functions of the biosynthetic gene clusters that produce …
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Nikos Kyrpides
… 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes … Crete, Greece … Pavlopoulos GA et al. (2023) Unraveling the functional dark matter through global metagenomics. Nature . … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar … Thomson Reuters …
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New Research Sheds Light on Diversity in the Deep Sea
… get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. … to better understand how these hydrothermal ecosystems function in such extreme conditions. They identified 511 new … of certain nutrients — influence the makeup and functioning of a given microbial community. Scientists with …
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Pests, diseases, and aridity have shaped the genome of Corymbia citriodora
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Scaling Up Existing Skill Sets
Over the course of the summer, the JGI-UC Merced Genomics Internship paired … in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer 2019 … Quantitative and Systems Biology Mentor: Ernst Oberortner, Functional Genomics What effect has your summer internship …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even … bacteria aren’t usually visible without the assistance of microscope. “It’s 5,000 times bigger than most bacteria. … and how molecular processes within and outside of these structures occur and are regulated  also remain to be …
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Atmospheric methane consumption in arid ecosystems acts as a reverse chimney and is accelerated by plant-methanotroph biomes
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Comparative analysis reveals signatures of differentiation amid genomic polymorphism in Lake Malawi cichlids
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Hiroshi Otani
… technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … regulator, is modulated through a novel mechanism. Nucleic Acids Res. 44, 595-607. Otani, H., Lee, Y.E., Casabon, I., … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …
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Dan Rokhsar
… directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of … IBM Watson Research Center, Yorktown Heights, NY … Publications … 2018 Marthella Foskett Brown Chair, … Genomics and Computational Biology … Education … Selected Publications … Awards and Honors …
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Genome of the Cyanobacterium Microcoleus vaginatusFGP-2, a Photosynthetic Ecosystem Engineer of Arid Land Soil Biocrusts Worldwide
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