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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the … viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization of … B.S. in Microbiology, Université Blaise Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, …
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Rex Malmstrom
… Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before … bacterial cells and amplifying their genetic material, thus bypassing the need to culture these microbes in the lab. … Ph.D. in Marine Biology/Biochemistry, University of Delaware BA in Biology, Boston University ( magna cum …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and … The team found that some of the adaptation strategies used by liverwort are also seen in flowering plants, or … ) conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 …
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Digging into Microbial Ecosystems Deep Underground
… “Microbes underpin so much of what we see on earth in terms of nutrient cycles and biogeochemical cycles…. Viruses play a pretty important … National Laboratory. Letters of Intent are due March 16, 2022 to freely access resources at multiple DOE user …
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Making a Lichen Together
… For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to … are able to partner to form lichens. Studying the symbiosis by investigating a lichen’s genomes and transcriptomes could … (IGSP 2008001) to DA, FL, and FD from the Duke Institute of Genomic Sciences and Policy (for DNA sequencing and …
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Back in the Lab: the 2023 Summer Intern Experience
… internship experience in several years for students and researchers alike at the JGI. With the past few years upended by the pandemic, 2023 gave interns the opportunity to be …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as … years where he was a driving force behind the development of numerous genomic resources that fostered the widespread … regulation, abiotic stress tolerance, and the mechanisms by which plants interact with their microbiomes. In …
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Ancient Algae Reveal Secrets of Plant Evolution
… Research uncovers the genetic foundations that helped plants conquer land over 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  Zygnematophyceae , … Settlement Biomedical Research Enhancement Funds as part of a startup grant of the University of Nebraska Lincoln, …
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Decoding Yellowstone’s Microbial Mats
… Life as we know it wouldn’t exist without cyanobacteria; they began oxygenating Earth over two billion years ago. A team of researchers set out to Yellowstone National Park to study …
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Georg Rath
… Before joining the JGI, he has been working on the boundary of life science and computational science with notable stops at NERSC, IMBA … (CAG), he sees his role as using the substrate provided by LBNL, where possible, and enriching it, where necessary, …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic biology and microfluidics at the University of California, San Diego. As the … BS in Biochemistry and Cell Biology, University of California, San Diego PhD in Molecular Biology, …
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The More the Merrier: Making the Case for Plant Pan-genomes
… system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with respect to … plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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