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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… For many scientists, the culmination of their work into a written report that is published in a … current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my first publication and it feels so rewarding,” Wint said. For Axel …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… — a tool within the Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has been developed to help … and researchers more about the patterns and functions of environmental microbes. Researchers can use the tool to correlate protein annotations with ratios of DNA sequence fragments from the ecosystems. Selecting a …
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Biochemical characterization of Fsa16295Glu from “Fervidibacter sacchari,” the first hyperthermophilic GH50 with β-1,3-endoglucanase activity and founding member of the subfamily GH50_3
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… early Earth conditions. The Science Through a combination of sequencing tools and techniques applied to samples … discovered and characterized a novel phylum-level lineage of archaea with at least two major subgroups dubbed … relied on a combination of phylogenomic analyses, transcriptomics for microbial genomic activity (gene expression), and …
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Integrating Experimentation with Data
… in Seattle, Washington.  Topics included:  Environmental Microbiomes Biodesign and Synthetic Biology AI/ML-enabled … The JGI and EMSL are U.S. Department of Energy (DOE) Office of Science national scientific user … community access to cutting-edge capabilities for omics-based and analytical characterization, imaging, and …
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A User-Centered Approach to Accessing JGI Data
… through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a common set of metadata. For Steve Wilson, JGI’s Systems Engineering … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. …
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, researchers have new insights … what is now the  Community Science Program Functional Genomics proposal call, the JGI synthesized hundreds of  genes … Scientists at Brookhaven National Laboratory’s NSLS-II used multiple x-ray techniques combined with advanced …
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Metagenome-assembled genomes of phytoplankton microbiomes from the Arctic and Atlantic Oceans
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DRAM for distilling microbial metabolism to automate the curation of microbiome function
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Recruiting Human Microbiome Shotgun Data to Site-Specific Reference Genomes
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IMG/M-HMP: A Metagenome Comparative Analysis System for the Human Microbiome Project
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Diversity and heritability of the maize rhizosphere microbiome under field conditions
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