Results

Integrated analysis of homozygous deletions, focal amplifications, and sequence alterations in breast and colorectal cancers
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A programmable droplet-based microfluidic device applied to multiparameter analysis of single microbes and microbial communities
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Salinity tolerance mechanisms of an Arctic Pelagophyte using comparative transcriptomic and gene expression analysis
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Pumping iron: A multi-omics analysis of two extremophilic algae reveals iron economy management
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, … he served as a Research Molecular Biologist at the USDA for 12 years where he was a driving force behind the … techniques) and utilizing these resources to understand genome organization and regulation, abiotic stress …
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in genome improvement …
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nifH pyrosequencing reveals the potential for location‐specific soil chemistry to influence N2‐fixing community dynamics
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CRAGE-mediated insertion of fluorescent chromosomal markers for accurate and scalable measurement of co-culture dynamics in Escherichia coli
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Virocell Necromass Provides Limited Plant Nitrogen and Elicits Rhizosphere Metabolites That Affect Phage Dynamics.
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A User-Centered Approach to Accessing JGI Data
… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last year, … the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. …
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SPRUCE-ing Up Science
… A former JGI intern is now applying his internship lessons on … one of the first students to participate in the DOE Joint Genome Institute (JGI)-UC Merced internship program, … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …
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High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1T (DSM 17521T) isolated from muddy waters of a drainage system in Chandigarh, India
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