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Whisperings from not so silent mutations
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Metagenomes from Arctic Soil Microbial Communities from the Barrow Environmental Observatory, Utqiaġvik, AK, USA
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… tools and techniques applied to samples collected from acidic iron-oxide microbial mats in Yellowstone … lineages found there and elsewhere provide researchers with insights into the evolution of life on Earth. For decades, … the JGI’s Community Science Program , the team used metagenome assemblies, transcriptomes and single amplified …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Over the years more than 3,400 genomes have been sequenced from curated DSMZ isolates, for which quality DNA has been … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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A More Intuitive Phytozome Interface
… website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  … BioMart data warehouse interfaces they have come to rely on from Phytozome, with a more intuitive interface, deployed on … answers to Frequently Asked Questions about the transition from Phytozome v12 to v13. Why is it necessary to retire …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… doing when starting the lab. It has been, especially from an early career perspective, been absolutely … chemicals with a wide range of potential applications. Q&A from the Webinar Q(uestion):  Are the JGI capabilities … one of us about possible proposals if it’s different from what is on offer and to see if it can be done.  After …
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Frederik Schulz
… Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of … for terrestrial protists. These approaches enable novel insights into the diversity and important ecological roles … al. 2022. Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature Reviews Microbiology …
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JGI@25: Strengthening Soybean
… and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program.    While soybean has … podcast minisode.)  In 2016, the JGI accepted a proposal from Sebastien Duplessis of the French National Institute … in size). So, the JGI helped a consortium of researchers from various institutions, including INRAE as well as the …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… of the flagship internship program between the DOE Joint Genome Institute (JGI) and University of California (UC), … of the 2023 cohort. Each of them has brought invaluable insights, thoughts, and explorations that has led to … all the work that went into this program was the feedback from the graduate student interns; “it changed what I want …
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Lost in translation: What we have learned from attributes that do not translate from Arabidopsis to other plants
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… help solve energy and environmental challenges.   The Human Genome Project began in 1990 when the U.S. Department of … years. The DOE brought together the people and resources from these three national labs to form the DOE Joint Genome … with the HudsonAlpha Institute for Biotechnology.   Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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Matt Blow
… Dr. Blow joined the JGI in 2009, and currently heads the Genome Analysis group. In this role he supervises the Genome Assembly, QA/QC, and User Support Analysis teams. … R&D for production and user science. He received his Ph.D. from the Wellcome Trust Sanger Institute and Cambridge …
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