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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… Multiple 2021 HPCwire Awards ” on the Berkeley Lab Computing Sciences site. Lawrence Berkeley National Laboratory … Choice Awards . NERSC, JGI, ESnet are U.S. Department of Energy Office of Science user facilities. The HPCwire … results this year by assembling a collection of large datasets that will enable scientists to explore and collect …
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Adopt-A-Genome
… In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These students analyze the genomes, write reports, and publish first-author papers, making the data available for future research. Hear from Rekha Seshadri …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Congratulations to Jane Grimwood, who has been appointed the Loretta Purdy Spencer Chair in Genomics at the … Biotechnology! Loretta Spencer served as a manyterm mayor of Huntsville, Alabama and is known for her contributions to … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 …
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The Mobilome in the Mire
…   For years, researchers have known that many datasets miss a key part of microbial genomes: the mobile genetic elements, or MGEs, that can move between organisms. But now, deep sequencing and new analysis methods are bringing this mobilome into …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… Back in 2011, JGI-supported researchers published a paper in the … metagenomics to identify over 27,000 microbial genes. The data from that study is now used across California State … University campuses for biotechnology education as part of a course-based undergraduate resource experience. Hear …
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MGM Workshop at Fisabio Summer School 2026
… Register here for the workshop The MGM Workshop is Module 4 of the Fisabio Summer School.  The workshop is addressed to … research, the health sciences and related fields who are interested in learning and sharing concepts, tools and … by Rekha Seshadri and Mateus Fiamenghi from the Microbiome Data Science group. …
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Tanja Woyke
… After studying the mechanism of action of antifungal natural products … postdoctoral research at the DOE Joint Genome Institute in 2004. The main object of her research was the symbiont … is the Microbial Science Program Head as well as our Deputy of User Programs. Click to learn more about the program's …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… As part of the JGI’s 25th anniversary celebration, the 2022 Annual … public and private sectors and it is still seen today as a massive feat in science and collaboration. In closing his … one second. “It isn’t just the generation of vast troves of data, it’s the new areas of scientific possibility that …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… A nuanced understanding of peat moss drives insight into carbon storage   The … a genus of just under 400 mosses that can carry up to 25 times their dry weight in water, makes up the … (A.J.S.) conducted by the US Department of Energy (DOE) Joint Genome Institute ( …
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery … been utilizing metagenomics as a way to study a collection of hard-to-culture microbes, but the efficacy of this … to high (596 genomes) complexity. The environmental datasets included metagenomic data from Crystal Geyser in …
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Annual Genomics of Energy & Environment Meeting
… Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & Environment Meeting! The JGI convenes this … infrastructure – DNA sequencing, synthesis, metabolomics, data analysis, and new technology developments – that the …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… A genetic architecture that is characteristic of the sex chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. … This work was supported by the NSF Dimensions of Biodiversity Program (DEB-1542509 to S.D., DEB-1542486 to …
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