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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… In microbial mats, communities of microorganisms live among viruses that infect them. But what trends govern those … and replicating with their host indefinitely. Now, in studying a microbial mat from Cone Pool in Mono County, … on culturing virus and host pairs in the laboratory to study their interactions. This work,  recently published in  …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) marked the visit of an esteemed interdisciplinary delegation from the University of Duisburg-Essen (UDE), Germany with … workshops. Of common interest is the method development to study active sites or single cells in their functional …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… Newly developed chemiluminescent biosensors shed light on how bacteria function and colonize diverse environments. The Science Cyclic … metal corrosion in oil pipes. Scientists have tried to study cyclic di-GMP and cellular networks with fluorescent … The work conducted by the U.S. Department of Energy Joint Genome …
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Open Frameworks Training the Next Generation of Scientists
… Educational training technologies provide opportunities for … describe a workforce development program for higher education that develops skills in fungal biology and genomics.  … genomes, but unfortunately there are not many available to study. This is because most fungal clades have no reference …
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JGI-UC Merced Interns Share Their 2021 Experiences
… JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate in professional development enrichment activities. For some students in … Evolution of the Mitochondria Internship … Cross Species Integration of Single Cell Transcriptomes …
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Trent Northen
… programs using mass spectrometry for energy and environmental research, including through the Joint BioEnergy … available to JGI users.  Dr. Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of microbes cycle carbon and …
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IMG/VR
… JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the … of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to leverage …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of invited speakers shared how … and new technology developments – has advanced their work on the world’s most pressing energy and environment … address of the 2023 JGI Annual Meeting. As the JGI’s Metagenome Science Program Head, Emiley Eloe-Fadrosh, …
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JGI User Executive Committee Expands
… of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). They are: Ivan Baxter of the … Center, Sundy Maurice of the University of Oslo, Aaron Robinson of Los Alamos National Laboratory, Rebecca Smith … Along with the existing UEC members, their areas of study span the research interests of the JGI’s user …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky Way, … categories: Catalog the human virome; Develop tools to study the human virome; Explore how the human virome … CheckV , which assesses the quality and completeness of metagenome-assembled viral genomes ( Nature Biotechnology , …
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Four Researchers Join JGI User Executive Committee
… of Energy user facility located at Lawrence Berkeley National Laboratory. Holly Bik of the University of Georgia, Greg Bonito of Michigan State University, Jonathan Eisen of the … data and expertise to the global research community to study complex biological and environmental systems. The …
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JGI@25: The Little Alga That Could
… In honor of the JGI's 25th anniversary in 2022, we have … (affectionately known as “Chlamy” to those who study it) a powerful reference organism for studying photosynthesis and cell motility. It’s also a model … C. reinhardtii on PhycoCosm … C. zofingiensis on Phytozome …
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