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At the Forefront of Terrestrial Virus Research
Gary Trubl is finishing his PhD in Microbiology at The Ohio State University, co-advised by Drs. Virginia … Matthew Sullivan. He shared a few thoughts on his summer at JGI through a program that provides graduate thesis research …
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How Microbes Can Protect Plants in Drier Straits
A mini-episode looking at the efforts of Pankaj Trivedi, whose New Investigator proposal was recently approved through the JGI Community Science Program, to use microbiome science to …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and … genomes. As mobile genetic elements like viruses spread their DNA, they can affect how microbes cycle nutrients and …
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Back in the Lab: the 2023 Summer Intern Experience
This summer marked the first fully in-person internship experience in several years for students and researchers alike at the JGI. With the past … interns the opportunity to be fully immersed in not only their work, but the opportunity to collaborate with and …
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A Powerful Technique to Study Microbes, Now Easier
Lawrence Livermore National Lab biologist Jennifer Pett-Ridge collaborated with JGI scientists on an ambitious project: to bring in robots … researchers and robots have made these experiments easier for scientists everywhere. …
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PhycoCosm Tutorial
Learn more about PhycoCosm, the largest interactive collection of sequenced algal genomes, … analysis tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of Science user …
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Evolution of a Fungal Gene Expression Regulator
Describing the largest analysis to date of the modified DNA base 5mC … organisms, 5mC is an important piece of how they regulate their genomes, but is not well understood in fungi. A team … ways to protect poplar and other crops being considered for bioenergy feedstock development. Summary With the aim of …
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“A STEM career is in reach and accessible”
Notes from the Summer 2018 Biotech Partners Interns from Antioch High School. Though … higher education and access to fulfilling science careers, JGI hosted five students from Antioch High School this …
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Understanding Wildfire Recovery, Starting in Soil
A metagenomic look at the soil microbes present a year after … The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, … and growth.  This study builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful …
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I-Min (Amy) Chen
Dr. I-Min A. Chen received her Ph.D. in Computer Science. Her research … of the Object-Protocol Model (OPM) data management tools for scientific applications developed at Berkeley Lab. Dr. … data, one of the most successful data management systems of their kind, deployed to tens of pharmaceutical and biotech …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
In this short video, UC Merced undergraduate and graduate students share how their summer internship experiences have influenced their … challenges they overcame, and what new skill sets they look forward to taking back to school.  The interns from this …
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How Filamentous Fungi Sense Food
Tracing gene regulatory networks in the model fungus  … Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct … which then can be explored in depth for multiple models and their close relatives across the fungal tree of life, …
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