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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in genetics as part of our  2022 Annual Meeting . The meeting … and Berkeley Lab, who discussed the exciting progress in gene editing made possible by CRISPR-Cas9; the Weizmann … work on transposable elements and how understanding these genes has helped pave the way for the conception of a …
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Natural Prodcast Episode 17: Cassandra Quave
… bioprospecting vs biopiracy, early stage drug discovery in general, and a possible data-driven future for plant natural … without giving any benefit back to the owners of that genetic material? So this is also relevant to bacteria. If … as we have today. And the sad truth is MRSA and staph in general kills more people than HIV/AIDS does every year in …
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A Community Resource for Secondary Metabolite Researchers
… secondary metabolites are produced by groups of genes known as biosynthetic gene clusters (BGCs.) As reported in the recent Database … system known as IMG-ABC. That portal contained biosynthetic gene clusters and secondary metabolites information from …
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Fungal Friends or Foes in Plant Roots
… plant-associated fungi. Their analysis identified fungal gene families that help determine if these fungi act as … genomes on the JGI data portal MycoCosm . They looked for genes known to be involved in fungal-host interactions and identified 84 gene families that were common in fungi that live within …
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A Plantiful Future: Xiaohan Yang
… Laboratory, believes they can. And, what’s more, that using gene editing technology to conscientiously mix traits of …
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JGI announces 2023 CSP Functional Genomics awardees
… and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the six …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple … diversity. The article adds to the compendium generated as part of Genomic Encyclopedia of Bacteria and … of these bacterial and archaeal genome sequences have been generated using techniques that the JGI has pioneered, …
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JGI announces final round of 2022 Functional Genomics awardees
… and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the final …
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JGI Workshop at SIMB NP Meeting
… often due to, for example, tight regulation of biosynthetic gene clusters (BGCs) in native hosts, the complexity of …
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Computationally Classifying Fungal Lifestyles
… were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, … by lifestyles. The machine “learned” to identify data generated in part through the 1000 Fungal Genomes Project, … Lawrence Berkeley National Laboratory (Berkeley Lab), has generated a more accurate phylogenetic tree tracking the …
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Mapping Heat Resistance in Yeasts
… proof-of-concept study, researchers demonstrated that a new genetic mapping strategy called RH-Seq can identify genes that promote heat resistance in the brewer’s/baker’s … tests to find associations between genotype – an organism’s genetic makeup – and phenotype – an organism’s physical …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… how crops and model organisms may evolve.  Determining the genetic codes of plants is often challenging because in many … it to any genome of interest.” This figure outlines the general methodology he and Rokhsar came up with: Until they … wasn’t completely accurate. “They took every single gene from octoploid strawberry, compared it to other …
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