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The Case for Conservation
… help improve crop yields.  The Science The fire moss Ceratodon purpureus is a short plant with a complex genome . Now, … technologies applied to the effort. The Impact Found on all continents, including Antarctica where it is a major … the U and V sex chromosomes of fire moss comprise a full third of each moss genome, and are almost four times the size …
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A One-Stop Shop for Analyzing Algal Genomes
… The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. … Science Interested in the genomes of algae? You now have one place where you can browse the genetic blueprints of … built-in connection to the DOE Systems Biology Knowledgebase (KBase) also allows researchers to study how …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Protein annotations provide insights into environmental tendencies The Science The  Metagenome Stability … the 12,063 metagenomes) and reduce it into two axes (LDA coordinates). These KNN-derived phase classifications can be … The work conducted by the US Department of Energy Joint Genome …
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JGI on the 2021 Highly Cited Researchers List
… Congratulations to the 2021 Highly Cited Researchers at the … Jeremy Schmutz Susannah Tringe Tanja Woyke Below are a few projects each of these researchers were involved in, … switchgrass biology. The information could be useful toward the DOE’s interest in harnessing the crop toward …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have … number of notable achievements that showcase our collaborations and capabilities to enable great science that will help … Max Planck Institute! This is the first science Nobel awarded to two women, with Charpentier and Doudna bringing the …
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The JGI Data Portal: Improving User Experience
… The human-centered, agile collaboration between the JGI and the information technology company Truss has resulted in the JGI Data … strategist and UX researcher on the JGI/Truss team. “Regardless of which tools you use, we encourage you to reach out … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Extracting the Secrets of Secondary Metabolites
… biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not essential for growth … may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and CRAGE … are microbial compounds produced in response to hardship or competition. They make up the foundation for a …
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A Grass Model to Help Improve Giant Miscanthus
… chromosomes of Miscanthus arose by ancient hybridization (polyploidy) and insights into the dynamics of gene expression as it grows back vigorously year after year … stressors such as drought and temperatures. Summary Images of giant miscanthus often appear in discussions of …
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Open Frameworks Training the Next Generation of Scientists
… Educational training technologies provide opportunities for … describe a workforce development program for higher education that develops skills in fungal biology and genomics.  … Science User Facility, and the DOE Systems Biology Knowledgebase (KBase). The JGI and KBase are both supported by the …
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Eelgrass Proves to Be Much Younger Than We Thought
… Recent study shows eelgrass has been around about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in … floor, these meadows are responsible for almost one-third of carbon sequestered in the ocean. In addition to …
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JGI Scientists Pen Genome Watch Articles
… of Science User Facility located at Lawrence Berkeley National Laboratory, are sharing their expertise in … to a broader genomics perspective. Woyke spread the word among her JGI colleagues, and they agreed, providing … As such, JGI is involved in a broad variety of genomics projects that relate to energy and the environment.” she …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… To boost crops more efficiently in the future, the evolutionary past may hold key insights. The way that plants process nutrients has a rich back story — they rely on enzymes that have been evolving for billions of years. … This way, these important tools are always around, regardless of malfunction or misplacement.  In studying this …
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