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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately facilitates microbial genome … computational biologist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … And since microbial genomes are simpler to model than large plant or animal genomes, they are a good starting point to …
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New and Improved: Eucalyptus Reference is Now Accessible
… are 900 species of eucalyptus. The trees are fast-growing plantation crops that supply wood and fiber for various … The new improved genome assembly generated through the JGI’s Community Science Program will help support targeted … to the efforts of the  U.S. Department of Energy (DOE) Office of Science Biological and Environmental Research …
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, … for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC Engagement Lead with a focus on adapting JGI workloads to run on supercomputing hardware and worked …
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2022 Progress Report
… Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National …
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Sequencing Technologies & Products
… Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing … with Science Programs and Operations teams to enable the JGI’s focus on expanding molecular capabilities and … capabilities.    Overview of sequencing products The JGI operates highly scaled short- and long-read sequencing …
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Benjamin Cole
… Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint Genome Institute, his focus was primarily on how plants interpret different light cues by altering their growth program, and on how plants coordinate their gene expression with light and temperature oscillations …
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A Grass Model to Help Improve Giant Miscanthus
… miscanthus often appear in discussions of rapidly growing plants whose biomass can be renewably converted into energy … and Bioproducts Innovation (CABBI), a Department of Energy (DOE) Bioenergy Research Center, along with researchers from … Biosciences Institute, the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Disclaimer
… by trade name, trademark, manufacturer, or otherwise, does not necessarily constitute or imply its endorsement, … statement of authorship are reproduced on all copies. The JGI is not responsible for the contents of any off-site …
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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital … has matured from six projects on a spreadsheet into a flagship  genomic metadata repository, making curated … projects carried out at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Phylogenomics reveals convergent evolution of red-violet coloration in land plants and the origins of the anthocyanin biosynthetic pathway
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PlantSEED enables automated annotation and reconstruction of plant primary metabolism with improved compartmentalization and comparative consistency
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Diel rewiring and positive selection of ancient plant proteins enabled evolution of CAM photosynthesis in Agave
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