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Genome Sequences of Two Carbapenemase-Resistant Klebsiella pneumoniae ST258 Isolates
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Draft Genome Sequences of Gammaproteobacterial Methanotrophs Isolated from Marine Ecosystems
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Complete Genome Sequence of Sulfolobus solfataricus Strain 98/2 and Evolved Derivatives
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Genome Sequencing Suggests Diverse Secondary Metabolism in Coral-Associated Aquimarina megaterium
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MGM Workshop at Fisabio Summer School 2025
… will be devoted to training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Natalia …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in … and Viola Willemsen. "Two deeply conserved non-coding sequences control PLETHORA1/2 expression and coordinate … Graham, Ramon Huerta, Ryan Johnson, and Lev Tsimring. "Microbial microfluidic biosensor." U.S. Patent 11,209,412, …
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Webinar: PhycoCosm Tutorial
… JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. … are based upon? A: This is still work in progress as new genomes are being added. We do plan to publish the tree or … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… has closed at the U.S. Department of Energy (DOE) Joint Genome Institute, a DOE Office of Science User … Asaf Salamov, Igor Grigoriev Project:  Training new JGI genomes with Tiberius Brandon Imstepf Mentor: Brian Bushnell … and Identification of Mitochondrial Plasmids from DNA Sequence Moitrish Majumdar Mentors: Bikash Shrestha, Crysten …
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When “The Blob” Made It Hotter Under the Water
… event may foreshadow climate change impact on marine microbial communities. The Science A team of researchers … samples. Genomic DNA extracted from the water samples were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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JGI Launches Latest Strategic Plan
… For the Joint Genome Institute, the end of 2018 was marked by a … over one “petabase” – a quadrillion nucleotide bases of DNA sequence to the public data repositories over its now … Basepairs — A Vision for Integrative and Collaborative Genome Science , the culmination of an eight-month intensive …
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Simon Roux
… in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to identify virus sequences, the design of new experimental approaches to link … knowledge of viral diversity and virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research …
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JGI Early Career Researchers Featured in mSystems Special Issue
… Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … recent Nature Communications paper, uncovering giant virus sequences in soil for the first time. A second approach … sequence reads to link mobile elements such as plasmids to microbial host cells. In a separate article, research …
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