Search

… (Berkeley Lab), the National Energy Research Scientific Computing Center (NERSC), the DOE Joint Genome … achievements in science, technology, and diversity/inclusion by the annual  HPCwire Readers’ and Editors’ Choice … JGI, ESnet are U.S. Department of Energy Office of Science user facilities. The HPCwire Editors Choice Award for Best …

… Nikos Kyrpides Dan Rokhsar Simon Roux Jeremy Schmutz Susannah Tringe Tanja Woyke Below are a few projects each of … (Watch SCGSR fellows Nick Reichart and Ian Rambo talk about their experiences at the JGI.) Igor Grigoriev hosted … developments that will enable researchers to move from identification of microbial novelty to assigning metabolic and …

… cow stomach. Rumen – and its microbes – are really a powerhouse. Rumen microbes have the ability to break down hardy … data obtained from environmental samples — to identify over 27,000 microbial genes. These genes were … expanded into three other universities. You can learn more about how JGI data supports higher education in this JGIota …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and in the laboratory. “We are fortunate because the progenitor species of  Brachypodium hybridum are … two  B. hybridum types don’t interbreed. “Preliminary artificial crossing experiments between ancestral and recent  …

… Pictured from left: [Above] Hanin Alzubaidy, Markus Covert, Sheel C. Dodani, Kathryn Fixen, Jane Fudyma, … The JGI is a DOE Office of Science national scientific user facility supported by the Biological and Environmental …

… popularizer and communicator (and at one time, the spouse of Lynn Margulis). The information was then used to predict the metabolic strategies applied by a common … a longtime JGI collaborator, postdoctoral fellow Paula Matheus Carnevali was working with a group of …

…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At first, viruses are merely toolkits. To do anything, they must find a host, and not just any host will do. It must be a … (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the …

… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … polar bears in winter scenes that came with crayons in various shades of white. To researchers searching for sequences … viruses is just the beginning. “I often say that just identifying a sequence as viral is not even half the story.” …

… the genome. Many plant pathogens such as the fungi that cause poplar leaf rust, are rich in transposons, which may help the pathogens … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and others like it, are uncovering the true … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office …

… (UC), Berkeley, UC Agriculture and Natural Resources (ANR), US Department of Agriculture P­­lant Gene Expression Center, … Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … its potential production of biomass on marginal lands not usable for conventional food crops. For that reason, its …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … a cold-adapted microalga: the diatom Fragilariopsis cylindrus . At that time, they noted that the F. cylindrus genome encoded more proteins requiring zinc than …

… that a new genetic mapping strategy called RH-Seq can identify genes that promote heat resistance in the … species to grow better than its closest relative S. paradoxus at high temperatures (39°C/102°F). The Impact One of the … DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility of Lawrence Berkeley National Laboratory, aim …