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JGI@25: Studying Sorghum’s Survival Skills
… little water, full sunlight and hot temperatures, sorghum plants can photosynthesize and thrive — some varieties grow … sorghum’s survival secrets could change not only how we use and grow sorghum, but other important crops as well. In … of sorghum begins. Enabled by the JGI’s Community Science Program, Todd Mockler and his team collect diverse lines of …
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JGI@25: The Little Alga That Could
… evolutionary history. Retaining ancestral features of both plant and animal cells, it shares nearly 7,000 genes with … production in other algae that may be more viable for sustainable biofuel production. The JGI published a partial … by Daniel Rokhsar, head of the JGI’s Computational Biology Program, along with JGI Computational Scientist Simon …
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A One-Stop Shop for Analyzing Algal Genomes
… an interactive browser that allows algal scientists and enthusiasts to look deep into more than 100 algal genomes, … and understand. A team of researchers led by Algal Genomics Program lead Igor Grigoriev and data scientist Alan Kuo at … analysis of fungal genomes, and Phytozome for comparing plant genomes. Kuo and Grigoriev encourage scientists to …
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Boosting Small Molecule Production in Super “Soup”
… to keep processes running smoothly. As reported August 26, 2021, in Nature Communications , researchers led by … supported through the Emerging Technologies Opportunity Program at the U.S. Department of Energy (DOE) Joint Genome … and so one of the things that I think is so special about this collaboration is that we’re doing work in yeast, …
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Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts
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Draft genome sequence of Marinobacterium rhizophilum CL-YJ9T (DSM 18822T), isolated from the rhizosphere of the coastal tidal-flat plant Suaeda japonica
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High functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plant
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Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
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Enrichment of root-associated Streptomyces strains in response to drought is driven by diverse functional traits and does not predict beneficial effects on plant growth
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… reductase system, researchers could open avenues for using bacteria to produce ethylene and more.  Microbes excel … funded by the Biological and Environmental Research (BER) program, together with understanding enabled by Basic Energy … contexts.  “That allows us now to really start thinking about the structure-function relationship. What could we do, …
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PhycoCosm Tutorial
… Learn more about PhycoCosm, the largest interactive collection of … tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of Science user facility at Berkeley Lab. Presented by Igor Grigoriev, …
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An Integrated Dataset to Understand Ecosystem Interaction
… time. By collecting data from 27 different poplar ( Populus trichocarpa ) trees, as well as the soil surrounding … researchers came from two environments: natural forests and plantations managed through human intervention. By … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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