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A Step Toward Controlling Soybean Rust
The United States  is the world’s leading soybean producer , and soybeans … better strategies to counter soybean rust disease. Soybean itself is a  JGI Flagship plant genome , and JGI  published its genome sequence in …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
As warm-adapted microbes edge polewards, they’d oust … organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for ‘wanderer’). But they vary across … without a defined nucleus). Colder waters nearer the poles, however, tend to favor eukaryotes ( microorganisms with a …
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Horizontal gene transfer in Histophilus somni and its role in the evolution of pathogenic strain 2336, as determined by comparative genomic analyses
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Comparative genomics, proteomics and transcriptomics give new insight into the exoproteome of the basidiomycete Hebeloma cylindrosporum and its involvement in ectomycorrhizal symbiosis
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Predicting the chemical space of fungal polyketides by phylogeny-based bioinformatics analysis of polyketide synthase-nonribosomal peptide synthetase and its modification enzymes
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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal … researchers developed an algorithm that “taught” a computer how to classify 101 representative genomes of … nutrients from decaying organic matter (saprobes), and many plant pathogens known to infect most major food crops and …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
Proposals aim to sequence and annotate genomes from Antarctica to … Many fungi have beneficial symbiotic relationships with plants and bacteria; in many instances, fungal physiology is … in learning more about the fungal endophytes of soybean and how they deter two significant pathogens, the soybean cyst …
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You Can Move, But You Can’t Hide
Researchers at the JGI develop a tool to quickly and accurately identify mobile genetic … more about the genomics of MGEs and their evolution at the cellular level, scientists can better understand …
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Len Pennacchio
In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused … Data Generation Platforms (Sequencing, Single Cell, DNA Synthesis, and Metabolomics) as well as Research & … regulatory sequences in the human genome. Understanding how variation in regulatory sequences influences human …
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A korarchaeal genome reveals insights into the evolution of the Archaea
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Murine colitis reveals a disease-associated bacteriophage community
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JGI Welcomes New UEC Members
Executive Committee (UEC) represents the JGI user community and is responsible for providing input and advice on JGI … who represent the scientific areas of plant genomics, DNA synthesis and metabolomics, respectively. To view the …
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