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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… This single environmental trigger highlights efficiency for users requiring multiple omics methods to examine microbial chemical production. The Science Soil … microbes can work with the JGI to apply the same integrated approach to unlock useful chemistry in their organisms of …
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Accelerating Metagenomics Discoveries with Deep Learning
… On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and other institutions shared their … the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector representations of … aligning sequences with popular, but computationally costly approaches such as BLAST and hidden Markov models (HMMs), …
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Disclaimer
… Department of Energy. Anyone using this system consents to monitoring of this use by system or security personnel. … With respect to documents available from this server, neither the United … Reference herein to any specific commercial products, process, or service by …
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Waiting to Respire
… Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More than two … of UC Berkeley geomicrobiologist Jill Banfield, a longtime JGI collaborator, postdoctoral fellow Paula Matheus … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and research scientist Frederik Schulz in …
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Refining the Process of Identifying Algae Biotechnology Candidates
… [subhed -- copy to summary above^ as well ] The Science The recipe for … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … content of biofuels sourced from algae. The collaborative approach highlights how the pipeline could help researchers …
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Yasuo Yoshikuni
… Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, strain engineering, … has supported over 250 projects since it started. At the JGI, Dr. Yoshikuni also manages the Synthetic Biology … and renewable chemicals, developing genome engineering tools for non-model organisms, modulating microbe-microbe …
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Eelgrass Proves to Be Much Younger Than We Thought
… when and how eelgrass adapted and evolved throughout its history. Their research, published in  August 2023 in  Nature Plants , was able to assess absolute time estimates for major colonization … of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, …
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Ian Blaby
… design and assembly, strain engineering and bioinformatic tool development/data analysis for synthetic biology and functional genomics. Prior to joining the JGI, he was a group lead at Brookhaven National Laboratory … of Cambridge., Microbial molecular biology Post-doctoral positions  – University of Florida; University of …
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Tour the IGB
… Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. To … zoom in and out. 1st floor 2nd floor 3rd and 4th Floors The JGI mural on the 3rd floor whimsically references dozens of … the science depicted, click here . <span data-mce-type="bookmark" style="display: inline-block; …
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Year in Review: JGI’s 2018 Progress Report Available Now
… The latest edition of the JGI Progress Report highlights notable research and … by the JGI (isolates here , here and here ), and the data has been used to better understand arsenic mobility and to better …
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Emiley Eloe-Fadrosh
… Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial … National Microbiome Data Collaborative (NMDC). Prospective users with questions on how to partner with the Metagenome … is the Metagenome Science Program Head at the JGI. Click to learn more about the program's areas of focus, major …
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First Monoploid Reference Sequence of Sugarcane
… “polyploid”) and their complex genomes are more difficult to sequence and assemble, in turn limiting the use of … a first monoploid reference sequence using a targeted approach that focused on the gene rich part of the genome by … polyploid sugarcane genome now underway as part of the JGI Community Science Program (CSP), a critical factor in …
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